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RTP_07252018_0_1um_scaffold_15622_4

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 3424..4104

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQZ6_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 211.0
  • Bit_score: 183
  • Evalue 1.40e-43
Helix-turn-helix, AraC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 211.0
  • Bit_score: 183
  • Evalue 4.00e-44
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 210.0
  • Bit_score: 190
  • Evalue 1.60e-45

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGACGGGGTTTGTATTATTTTTAAATAGTCACTTACACAACTGCCGGCCACTGTTCTTAGATAATATCATACCATCCCCGCGTATCCGCGAATTTGTACGGCTATACCGTATTGTTGATTTCATGTTCACAGACAACCGGCCCATTCCTTCCAAAGCCTATACACCACAGGCAGAAGAATGTCTGCAGTTTTATCCGAAAGACACTGAAACCGTTCGTTATCCGGATAACAGGACAGAGATTGGTAAAATAAGCAGTTCATTGGTTGGCCAGCACACTGTTGTAAATCACCGGCAGGTGGGAAAAAACTTCCTGACTTTTCAGGTGGTTTTTCAACCGGGCGCTTTGTTCCGTATCACTGGCATTCCTTCGCAGGAGCTGGTAAACCAATACCTGGATGCTACCCTGATTTTCGGTAAGGATGTGCAGTTAATCAACGAACAACTTTTTCAGGCAGACTCACATGCAGGCATGACAGCAATCGTGGAAGACTATCTCTTTAACCGGATCTGCATTCCCAGAAAATCCGCTTCACGCATTGATCCTGTTTGCCAGCAGATGCTGCTGGAGCAGGAACCTGCATCACTTGACTGGTACATCAGGCAATCCTGTTTGAGTCACCGCCAGTTTGACCGTCATTTTAAGGACCGCACCGGCATTTCGCCCAAACAATGGTTACGG
PROTEIN sequence
Length: 227
MTGFVLFLNSHLHNCRPLFLDNIIPSPRIREFVRLYRIVDFMFTDNRPIPSKAYTPQAEECLQFYPKDTETVRYPDNRTEIGKISSSLVGQHTVVNHRQVGKNFLTFQVVFQPGALFRITGIPSQELVNQYLDATLIFGKDVQLINEQLFQADSHAGMTAIVEDYLFNRICIPRKSASRIDPVCQQMLLEQEPASLDWYIRQSCLSHRQFDRHFKDRTGISPKQWLR