ggKbase home page

RTP_07252018_0_1um_scaffold_14944_5

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(3171..4868)

Top 3 Functional Annotations

Value Algorithm Source
xylanase (EC:3.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 426.0
  • Bit_score: 154
  • Evalue 6.40e-35
CHU large protein candidate xylanase, CBM9 module, Glycoside Hydrolase Family 10 protein {ECO:0000313|EMBL:ABG59306.1}; EC=3.2.1.- {ECO:0000313|EMBL:ABG59306.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 426.0
  • Bit_score: 154
  • Evalue 3.20e-34
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000379E510 similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 526.0
  • Bit_score: 167
  • Evalue 2.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1698
GCGGTTAATAACGGTAGTTGTGGTACAACTACCGACCCCGTAACTGTTATCGTTACTTCATTGCCGGTTGCAACTATTGCAGCTGCAGGTGCTACCAGTTTCTGTACAGGTGGGTCAGTGGTTTTAACAGCCTCCTCTGCTGCCGGTTATAACTGGTTTAAAAATGGTGTAGCACTCGGAGCCAGCTCTCAAACTTATACCGCTACCAATAGCGGAAACTATACTGTTGAGATAACCAACGCTAATGGTTGCTCAGCAATTTCTGCTCCTGTGGTTATTACCGTTAATGCAAATCCTGTTGTGAATGCTATCACCGGTAATACAACAGTTAATGCAGGGGCTAATACACCGCTCTCCCCCACCACTCCTGGTGGCGTTTGGAGCAGTAGCAGCAGCAACGCTACTGTAAATGCAACCGGTCTGGTAACAGGTGTTACCGGCGGATCAGCTACTATCAGTTATACTGTAACCAATGCATCCGGTTGTATAACTTCAGTAATAACAGTGGTTACTGTAACCTCCATCCCGGTTTGTAATGTGTTGCCTAATGCTATCATTACTTCCAGCAGTGCAGATGCTTTCTGTAATAAAGTAACCCTTACCGGTTCTACTTCTTCCGCTAATCCGAGTTATAAATGGGTAACTGCCAACAATACGGTATATGCTACCACCCAGCAGATTTCATTGGATCTGGCCAGCAACGAAGGCGATTATAAATTATATGTTTCTGCCAATGGTTGTACCAGTCTGGCAGCCACATATACCTTCCGTAAACAGGATCAGGTAAGCAGTTATACTATTTTGGCATATAAAAAAGTTGATTTGGGCAAATACAATAAGGTTTCTTCAGGTAGTATTGGTGTGATGAATGAAAGAGGAGAAGCTAAAATTGACAAATACAGTTATATCACTGGTCAGGGAGCTTTCGTAAAAGCGCCTAAAATTGACCGGAATAGCGGATCAAACTATGGTTGGAGCTGGGGTTGGGGTAACTGGTATACTAATTATAGTAACAGCAATAGCAATAGTTTCCAGAGCATATATGGTACCGCCAATGTAACATTGCCTGTTATGCAATCTAATACGGCCAGTACCAGGTATCTATCCAGTTATACAGTTTCTTCTTACGCAAACGTTACTTTGAACGGAAACTATAAAACCCTGATCATTCGTAAAGGCGCAACAGCGATACTGTACGGAAATACCTTTGGTACCATTGATCTGGAAGAAGGTGCCAGCGTTCAGTTCAAAGCAAGCGTACTGAATATCGAAAACCTGATTGTGGAAGATGGTGCCAGAGATGGTTACTATAGCTATGTTCGTTTTGCACCTGGTACCAGCGTAAGGGTTAGCAGTAAAGTGAAAATCGGAAGCCAGGTGATTGTAAACCCTGACTACCACACCGTTACTTTCCACATGGCTGATCAGCGTTCAGATGAAGAGAAATTTACTGTGAAAGGTGTTGATACCAAGGTGATTGCCAATATCCTGATGACCAATGGTAAATTGTATGTAACGGCTTCTTCTGATGGTAAGGATGATGGACATCATGGTCACGATGATGACGATGACGACGATGATGATGATCATTGTGATCATAAATCACATAGCTCATGGAATTGTAAACACAAAGGCCATGGTCACAAAGACTGTGATCACAAATCGCACAACGAGGATTATTTGTGGCAGAAACCGTAG
PROTEIN sequence
Length: 566
AVNNGSCGTTTDPVTVIVTSLPVATIAAAGATSFCTGGSVVLTASSAAGYNWFKNGVALGASSQTYTATNSGNYTVEITNANGCSAISAPVVITVNANPVVNAITGNTTVNAGANTPLSPTTPGGVWSSSSSNATVNATGLVTGVTGGSATISYTVTNASGCITSVITVVTVTSIPVCNVLPNAIITSSSADAFCNKVTLTGSTSSANPSYKWVTANNTVYATTQQISLDLASNEGDYKLYVSANGCTSLAATYTFRKQDQVSSYTILAYKKVDLGKYNKVSSGSIGVMNERGEAKIDKYSYITGQGAFVKAPKIDRNSGSNYGWSWGWGNWYTNYSNSNSNSFQSIYGTANVTLPVMQSNTASTRYLSSYTVSSYANVTLNGNYKTLIIRKGATAILYGNTFGTIDLEEGASVQFKASVLNIENLIVEDGARDGYYSYVRFAPGTSVRVSSKVKIGSQVIVNPDYHTVTFHMADQRSDEEKFTVKGVDTKVIANILMTNGKLYVTASSDGKDDGHHGHDDDDDDDDDDHCDHKSHSSWNCKHKGHGHKDCDHKSHNEDYLWQKP*