ggKbase home page

RTP_07252018_0_1um_scaffold_15839_4

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(2190..3071)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Segetibacter koreensis RepID=UPI00036E2C5E similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 293.0
  • Bit_score: 482
  • Evalue 1.90e-133
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 295.0
  • Bit_score: 477
  • Evalue 2.20e-132
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEV98375.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 295.0
  • Bit_score: 477
  • Evalue 1.10e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
CTGGATCAGCCCAAATGGAAACAGTTTGTGCTGTATCTGAATGATGTGTCGCCGGTGGCGGTGCACACAACAGCAGACATAGAAAAAAAACAACTGAAAGGATTTTTCATCGGAGGTGAACAGAAGTTAGGGATTAAAGTGCCTTATCTACGCCGTTCCTATCAAACCAAAAAAGACGTAGGGGAACTGTTGATGGAAGCCCTGCCGGGAACTCTGGTGCTGGCGCTGGCTGCCATGTGTATCGCTACGCTGATCGGGATTTTGCTCGGTATACTTGCCGCCGTAAAACAAAATACCTGGATGGACACATCCGCCATTTTTGCCAGTGTGCTGGGTATTTCAGCGCCTTCTTTTTTTATGGGAATTGTGCTGGCTTATCTGTTTGGATTTGTATTGAGCCCGTACACCGGTTTGCACATGACGGGTAGCCTGTTTCAGATCGATCCCTTTACCGGGAAAGAACTGCAACTGAAGAATCTGATTTTACCGGCCATTACACTGGGCATCCGTCCACTGGCCATCATAACCCAACTCACCCGCAGTTCTATGCTGGATGTACTTGACCAGGATTATATCCGAACGGCCTATGCCAAAGGGTTATCTAAAAAAATAGTCATTTTCCGCCATGCTTTGCGCAATGCGTTAAATCCTGTTATCACCGCCATTACCGGCTGGTTTGCAGAATTACTGGCAGGTGCTTTTTTTGTGGAATATATTTTTGGCTGGAAGGGAATTGGAAAAGTAACGGTAGATGCATTGGAGAAATTAGATTTTCCGGTAGTGATGGGCAGTGTTTTGATTACCGCCACCTTCTTTATCATCGTAAATATTCTGGCCGATCTGTTATATGGAGTGGTTGACCCGCGTGTTCGGGTTAAGTAA
PROTEIN sequence
Length: 294
LDQPKWKQFVLYLNDVSPVAVHTTADIEKKQLKGFFIGGEQKLGIKVPYLRRSYQTKKDVGELLMEALPGTLVLALAAMCIATLIGILLGILAAVKQNTWMDTSAIFASVLGISAPSFFMGIVLAYLFGFVLSPYTGLHMTGSLFQIDPFTGKELQLKNLILPAITLGIRPLAIITQLTRSSMLDVLDQDYIRTAYAKGLSKKIVIFRHALRNALNPVITAITGWFAELLAGAFFVEYIFGWKGIGKVTVDALEKLDFPVVMGSVLITATFFIIVNILADLLYGVVDPRVRVK*