ggKbase home page

RTP_07252018_0_1um_scaffold_29599_3

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 1825..2016

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyproline epimerase {ECO:0000313|EMBL:AEI48979.1}; EC=5.1.1.8 {ECO:0000313|EMBL:AEI48979.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 49.0
  • Bit_score: 87
  • Evalue 4.20e-15
4-hydroxyproline epimerase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFU3_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 49.0
  • Bit_score: 87
  • Evalue 3.00e-15
4-hydroxyproline epimerase similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 49.0
  • Bit_score: 87
  • Evalue 8.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 192
ATGCTCACCCAACCTATTCCGTATATCCCCATTGCGTCAGGCCATCTTGGCGGCGCTGTGTTTTCCTGTATTGATGCGCATACCTGTGGCAATCCTGTAAGGGTAGTTGCTGCTGGTGGACCAGCTTTAGAAGGTGCCAATATGAGCGAGAAAAGACAGCATTTTTTAAGAGACTTTGACTGGATAAGAAAA
PROTEIN sequence
Length: 64
MLTQPIPYIPIASGHLGGAVFSCIDAHTCGNPVRVVAAGGPALEGANMSEKRQHFLRDFDWIRK