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RTP_07252018_0_1um_scaffold_47445_1

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(2..490)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 163.0
  • Bit_score: 175
  • Evalue 3.60e-41
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 163.0
  • Bit_score: 175
  • Evalue 1.00e-41
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 163.0
  • Bit_score: 175
  • Evalue 5.00e-41

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 489
TTGCAATTGAGCCTTGACATAACAGTAAATAACCTGGTAGACAAATGTGTACAGGGCGACATGAGCGGATACCGGCTTTTGTATGATCATTATGCGAAAGCTATGTACAATACTGCTTTGCGGATCGTAAACAATACGGCAGATGCAGAAGACATATTGCAGGAAGCGTTTACGGATGCGTTTTACTCGCTGAATACATACAGGCAGGAAGCCAGTTTTGGTGCCTGGCTGAAACGGATCGTGATCAATAAATCGATCAACAAAGTAAAACGTGACCGGAATAAATGGGTGGAAGTAGACCAGGGATCGATAGCGGACTATGCCATTTACGACGAACCTGAGATAGACGAATCTGATTTTACTTACCGTGTAGACAGCATTAAAAAAGGTATCGGTGAATTACCGGATGGCTACCGGACCGTTTTATCGCTCCACCTGTTAGAAGGATTGAAACAGGAAGAAATTGCAGGGTTATTGGGTATTTCGCAT
PROTEIN sequence
Length: 163
LQLSLDITVNNLVDKCVQGDMSGYRLLYDHYAKAMYNTALRIVNNTADAEDILQEAFTDAFYSLNTYRQEASFGAWLKRIVINKSINKVKRDRNKWVEVDQGSIADYAIYDEPEIDESDFTYRVDSIKKGIGELPDGYRTVLSLHLLEGLKQEEIAGLLGISH