ggKbase home page

RTP_07252018_0_1um_scaffold_43750_2

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(327..1529)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transporter TonB n=1 Tax=Pedobacter agri RepID=UPI000299EE17 similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 401.0
  • Bit_score: 421
  • Evalue 5.40e-115
Energy transducer TonB {ECO:0000313|EMBL:KIA95866.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 398.0
  • Bit_score: 429
  • Evalue 4.80e-117
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 404.0
  • Bit_score: 387
  • Evalue 2.40e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1203
GTGAATTATGAAGCAAGACATCGTTTCCCGAAATGGGCGGGGCTAGACATTACACTGGGTATTAACGGCATGTACCAATCTAACCGTAACAAGTCGGCTACTGATTTCCCGATACCTGATTACCGTTTATTTGATATCGGTAATTTTTTAGTGATCAAGAAAGAATTCGATAAAACAGTACTCACAGGAGGCATCCGGCTGGATAACCGTTCTGTTACCTGGAATGATTTTTATACCAGAAAAAACAGCAGCGGCTTTTTTCAACAGGTACTTTTGCCTGATACTGCAGGTGCTACTTTGAACTTCCCGTCTTACCGTCGTCATTTCAGTGGTGTATCGGGCAGCATTGGTATGGTGCAGAATGTATCGCATACCGTTACCCTGAAAGCCAATATAGCCAGTGGTTACCGGAGTCCTTCTATTCCGGAGATCGGTTCAGACGGACTGGATCCGGGTGCGCATATTTATTATATCGGCAACCGCAACTTTACTCCGGAATACAACTGGCAGGCAGACCTGGGATTATTTTACAGCGATGCAGATTGGGACGCCAACCTGGAATTGTTTCATAACCGCATCAATAATTATATTTTCTTTCAGAAACTGTTTGATGCCAATGGTCAGCCACTGGAACTGGTGCCCGGTAATTTTACGTATCAATACAAACAGGGTAGTGCTGTATTGTATGGTGCAGAAGCCAATATCAGTTATCATCCCAAACAATTGGCCTGGCTGCAGTTTCAGCATAACCTTTCTACCATTACAGGAATCAATACAGATCAGCCAAGCCTGAAACTGCTGGGTGATGCTGCCAGACATCTGCCGCTGATTCCTCCTTTCAGAACGGTGAACCGCTTACGTTTTTTATTGCCACAGGTGAACCGGATTTTGTCTGATGCTTACCTGCAAACTGAAGTAGAAACCTATGCCACGCAAAACCGCTTTTATGCAGTAGACAATACCGAAACGGCCACACCAGGTTATACACTGGTAAATATGGGAATGGGGGTCAACATCGGCAACAGCACCCAAAAAAATAATTGCCAGCTGTTCATCAATGTCAATAACCTCTTCAATACCGCTTACCAATCGCACCAGAACCGTTTAAAATATTTTGAGTATTTCCAATCCTCCCCCAATGGCCGTTCCGGTATCTATAATATGGGCAGAAACCTGGTTGTTAAGCTGATTGTGACCTGGTAA
PROTEIN sequence
Length: 401
VNYEARHRFPKWAGLDITLGINGMYQSNRNKSATDFPIPDYRLFDIGNFLVIKKEFDKTVLTGGIRLDNRSVTWNDFYTRKNSSGFFQQVLLPDTAGATLNFPSYRRHFSGVSGSIGMVQNVSHTVTLKANIASGYRSPSIPEIGSDGLDPGAHIYYIGNRNFTPEYNWQADLGLFYSDADWDANLELFHNRINNYIFFQKLFDANGQPLELVPGNFTYQYKQGSAVLYGAEANISYHPKQLAWLQFQHNLSTITGINTDQPSLKLLGDAARHLPLIPPFRTVNRLRFLLPQVNRILSDAYLQTEVETYATQNRFYAVDNTETATPGYTLVNMGMGVNIGNSTQKNNCQLFINVNNLFNTAYQSHQNRLKYFEYFQSSPNGRSGIYNMGRNLVVKLIVTW*