ggKbase home page

RTP_07252018_0_1um_Bacteroidetes_45_6

In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: Bacteroidetes  →  Bacteria

Displaying items 601-632 of 632 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_24503
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 2293 bp 42.87 6.61 86.48
RTP_07252018_0_1um_scaffold_27370
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 2129 bp 46.92 6.41 96.95
RTP_07252018_0_1um_scaffold_32675
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1882 bp 48.25 6.30 92.14
RTP_07252018_0_1um_scaffold_40748
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 1613 bp 46.68 8.00 90.20
RTP_07252018_0_1um_scaffold_30800
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1964 bp 46.18 7.10 94.09
RTP_07252018_0_1um_scaffold_31688
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1923 bp 46.54 4.99 100.00
RTP_07252018_0_1um_scaffold_34097
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 1827 bp 42.09 4.43 81.12
RTP_07252018_0_1um_scaffold_25405
Species: Niastella koreensis (50%)
2 2241 bp 43.64 5.02 85.41
RTP_07252018_0_1um_scaffold_28701
Species: Flavihumibacter sp. ZG627 (50%)
2 2062 bp 46.85 5.97 92.39
RTP_07252018_0_1um_scaffold_39231
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 1656 bp 43.96 5.62 99.09
RTP_07252018_0_1um_scaffold_28193
Species: Flavobacterium sp. F52 (50%)
2 4077 bp 47.04 7.69 84.25
RTP_07252018_0_1um_scaffold_24014
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 2324 bp 43.55 4.78 74.23
RTP_07252018_0_1um_scaffold_40792
Species: Mucilaginibacter paludis (100%)
1 1611 bp 42.64 5.03 57.36
RTP_07252018_0_1um_scaffold_35754
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1768 bp 46.61 4.75 85.01
RTP_07252018_0_1um_scaffold_31753
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1921 bp 43.62 6.56 52.63
RTP_07252018_0_1um_scaffold_15398
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 3131 bp 46.60 5.80 95.91
RTP_07252018_0_1um_scaffold_43455
Species: Cesiribacter andamanensis (100%)
1 1539 bp 42.11 6.63 93.18
RTP_07252018_0_1um_scaffold_37243
Species: Niastella koreensis (100%)
1 1719 bp 46.31 4.19 99.83
RTP_07252018_0_1um_scaffold_32272
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1899 bp 46.76 6.56 83.89
RTP_07252018_0_1um_scaffold_19166
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 2701 bp 47.17 4.72 97.74
RTP_07252018_0_1um_scaffold_38071
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1692 bp 46.04 5.41 80.67
RTP_07252018_0_1um_scaffold_46081
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 2407 bp 43.62 6.73 84.75
RTP_07252018_0_1um_scaffold_40886
Species: Solitalea canadensis (100%)
1 1608 bp 46.83 5.78 100.00
RTP_07252018_0_1um_scaffold_42639
Species: Flavihumibacter sp. ZG627 (100%)
1 1559 bp 46.50 6.45 99.87
RTP_07252018_0_1um_scaffold_39108
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1661 bp 45.33 5.42 85.61
RTP_07252018_0_1um_scaffold_31340
Species: BJP_IG2102_Bacteroidetes_40_12 (100%)
1 1938 bp 44.94 3.72 78.95
RTP_07252018_0_1um_scaffold_33533
Species: Flavihumibacter petaseus (100%)
1 1848 bp 44.59 4.30 99.84
RTP_07252018_0_1um_scaffold_26345
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 2188 bp 47.12 6.24 95.98
RTP_07252018_0_1um_scaffold_36550
Species: Niabella soli (100%)
1 1741 bp 45.43 5.69 81.33
RTP_07252018_0_1um_scaffold_41594
Species: Pedobacter sp. BAL39 (100%)
1 1588 bp 43.77 6.23 59.13
RTP_07252018_0_1um_scaffold_20766
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 2561 bp 44.83 5.21 96.52
RTP_07252018_0_1um_scaffold_29225
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 2035 bp 43.05 7.59 67.37
Displaying items 601-632 of 632 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.