ggKbase home page

RTP_11222018_0_1um_scaffold_973_24

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 17850..18479

Top 3 Functional Annotations

Value Algorithm Source
Carboxysome structural protein CsoS2 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL96_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 217.0
  • Bit_score: 135
  • Evalue 5.30e-29
Carboxysome structural protein CsoS2 {ECO:0000313|EMBL:CDQ09934.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 219.0
  • Bit_score: 142
  • Evalue 6.10e-31
carboxysome structural protein CsoS2 similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 217.0
  • Bit_score: 135
  • Evalue 1.10e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGAATGATGCTATGGCAAATAATACAGCAACTCCCCGCTCGGCACGCGCCGCAGCGTTGGAGCGGCGGCGAGCGTTGTCCCAGAATGGGCGCGCAGCGTTGGCACCAAAGCCATCACAATCAGCGACAGCGATGGTTAAGTCTGACGTGGTCGCGGCGACGACGACAGCGGCAGCTCAACCAGCTTCAGAGCGCGTAAGCTCGGTTCAGGTTGCGCCAGCGGCGTCAGCTACGGGTTCTATAGTGGCTAGCCTCTCGGGCAAATCACTTTCAAGAGCGCGACGTGAGGCTTTGTCGCACGGTGGAAAAGCAGCATTAGGTGCAATCAAAACGGCCTCTCGTGTAGTGAGTCAGGTTCCGGCTGCCGTCACACCTGTGTCAACTGAGACAGTTGTGCTATCTTCAGACTGTGGTTGTGGTTGTAAAGGTAAAGAAAAAATCGAAGCCGCTGAGTGCGAGCAGGAGATTGATGCAGTATGTGCGATTGTAGATGATGAGCCGCTGGCGTTGCCGGGTGCCATTGTTTCTGCAGTGCGTAAGTTGTGTCAAGAACGGCGTCTCGTGGCGATGAAGCTGCGTGCCGACCTAGTGGTCGGGTGCGTCCTAAGCCGTCTGTCCCTGCGAAAGTAG
PROTEIN sequence
Length: 210
MNDAMANNTATPRSARAAALERRRALSQNGRAALAPKPSQSATAMVKSDVVAATTTAAAQPASERVSSVQVAPAASATGSIVASLSGKSLSRARREALSHGGKAALGAIKTASRVVSQVPAAVTPVSTETVVLSSDCGCGCKGKEKIEAAECEQEIDAVCAIVDDEPLALPGAIVSAVRKLCQERRLVAMKLRADLVVGCVLSRLSLRK*