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RTP_11222018_0_1um_scaffold_833_1

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3..3167

Top 3 Functional Annotations

Value Algorithm Source
VGR-related protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IZG2_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 1012.0
  • Bit_score: 778
  • Evalue 4.60e-222
VGR-related protein similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 1012.0
  • Bit_score: 778
  • Evalue 1.30e-222
VGR-related protein {ECO:0000313|EMBL:ADJ62282.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 1012.0
  • Bit_score: 778
  • Evalue 6.40e-222

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3165
GCCGCACTGGCTTATGCAAGTGATACGCGACTGTATGCGTTCACCTTGGCCAATACTGAGGGGCTCACCCCTTGGCTAGACAACAACGGTTTATTAGTTGCCGCTTTCACCAGCACCGACCAGCTGCATGCTATCCCGCATACCGACATGGTCGTGCTCTCTCGTCGCCCTGACCTGCCTTTACACTCCATCATTGGCCGTGCTGCCACCCTGCACATCAGCCTTGCCAACGCCGAGCGTAGCCACCTCAATGGTTTCATCACCGACATTCAGCCGCTAAGCAATGATGGCGGTATAACCCGTTATCAATTACGGTTATCCCCCTGGCTGGACGATTTACGCCATGTCACCCATAGCCGGGTCTGGCAGGAGCAATCGGTGCAGACGATTGTGGACAGTGTGTTGGCTGATTATGCGCCTCGTGCCTACTGGCACTGGAGCAATGATGCGGTGTCGTTGTTGTCTGCTTTGCCTGTGCGTAGCTATTGTGTGCAGTATCGGGAGTCGGATCTGGATTTCATCACTCGGTTGCTGGCCGAGGATGGCTTGAGCTGGCGCGTGGATCAATTTGACGTGGATGCGCCTGATGGGCATACCTTGGTGTTGTTCTCTGATAGTACTGAGGTCGGTGCTTGTTCTGCCGTACCGTTCTCGCCTGCGGCGGGGTTGCGCTTTGCCGGGACGGGTTCGCAGCAGCAGGCTGATAGCGTGACGGCGTTGTCGGTGGCGCAAGAGCTGCTGCCTGCGCGGGTGACGTTGGCGAGTTTTGATTATAAGGCGAAGTCGGTGCTGGCAAGTTCAGTGCCTACGCAGTTGGATGTGGGCGGTACGCAGTTCAAGCAGTTGCCGCCGATGGAGCGTTATGACTATGCGGGGATGTATGCGTTTAGTCAGTCGGATCAGGCGCAACGTCATGCGGTGTTGCAGATGCAGGCGCGGGAGGCACGTCAGCAGGTGTGGGCGGGTTTGAGTACGGTACGCAGTGTGCGCGCAGGCTTGCGCTTTGAGATAGACGGGCATCCACGACTGGGTGTTGCCGGGGCGGTGGCGACACCAAAGGCGTGGGTCAGTACGCAGGTGATACAGGTGGGGATTAATAATCTGCCTTATGCAACCCACGGTGCCAGCAGTGAGGTGTTACCGGCTTTGGTAGCTTGGTTGGAGGCGCAGCTAGCAGTGCAGTCGCAAGGACAAGGACAATCACAGGCAGTTACGTTGAGCACAATGGAGGTTGATGCGTTAGCGATAGATCCGCTCACTGCCCCGCTCGCTGTGAATACGCGCACGCTGCTGATAGCCTCGACGCAACGTCTGGGTTATGCCAATGCGTTTATCGCCTTGCCTGCCAACCGCCCTTGGCGACCCTGGCAGTCGCGGACTTTGCATAGATTGCCGACCATGGTGGGTAGTCAGACCGCGCGGGTGGTAGGGTTTGAGGGGGGTGATGGGGGGAGTGCTGGTACTGGTAGCGCTAGTGTTGGTAGTGCTAGTAGCGGCAGCAATGAGCAGGACAGCTCCGCTGCCCTGCTCGGCAATGATGAGATATGTTGTGATGCGCTGGGACGGGTGCGGGTACGTTTTCAGTGGCAGGATGCGTTGGACCAGTCTGGTAGCCGTGCCAGTTGTTGGGTGCGGGTGGCACAGCGTTCAGCATCCGGCGGTATGGGCAGTCAGTTCCTGCCCCGTATCGGGCAAGAGGTACAAGTCCAGTTTATGGAGGGTGACGTCAATCGCCCGGTGGTTGTGGGTGCGTTGTACTTTGGACAGGGTGAGGCAGGTGTGCCGGCGACGCCTGCGGGATTATTGGTGGATGCGGATACCAGTGCGCTGAATCAGGCAACCGATCACAGTGTGTCGGCGCAAAGCAATTTAACAGCGGGTTATGCACCTGCCTGGCATGGTGCGGGAGTGGGTGCAGATGCCCATAATAATGCCGCTGCACAATGGGGTATCCGCAGTCAGGAGTACAGTGGGTCTGGTTATAATCAGTTGGTGTTTGATGACAGTGATGGCGAGGGTCGGATACAGTTGAAGACGACGCAATCAGGGACGGAGTTGAATCTGGGGCATCTGGTACATACAGCAGATAATTATCGGGGCAGTTTCCGCGGCAACGGCATAGAGCTGCGCACGGATGCTTGGGGTGGGTTGCGGGCAGGTTCAGGCTGGCTTATCACCAGCTATGGCATCCAGCACAGTCAAAGCCAGCGCCAACCTGCCGCTGACCTGCCCGCCGGGTACGGCTTATTGAGCACTGCCAACACGCTGGGTGCAAGTTTGAGCCAGCTGGCAGACAGCCATTTAAGTGTAGCTATCGCCGCGCTTAAAGGCAGCAGTGTAGCCAATGCCAGTGCGCTTAATGACAGCGCAGCACCGTTACCTGCATTGGGTAAGGTGATGCAAGGCATGGTCAACGCCAATCAGCTCGATGCTGCTCAGAATGATGCCGCCGCTCACAACACGCAGGCGGATGACCAGCATCTGCCACATCACACTGATCCTATCATCAGCGTCATTGCTAAGAATGATTTAAGCATGACCGCCAGACAAAGCATGCAGTTCAATGCAGGTGAAACGCTGAATATCCTCAATGCGGCAGAGAGTCAGTACACCACGGGGGGTGTATTCCGTATTCACAGTGGGCAGGCAATAGGCTTGACAGCTGGGGGATTGAAGCAGAATGCTACGGCGGGCTTGCAGTTGATTGCGGCTCAGGGCGACACGACGATTCAGGCGCATAACGATATTATTAGTCTGAAGGCTAAAAACAATCTGGATATGAAGAGTGCGCAGGCGAGTATAGATTTCGCAGCGGCGACGGAAGTTACGCTACGAACCGCGGGGGGTGCGTGTATCAAGATTGCTGGCGGCAATATTACCGTGCAGTGCCCAGGCAAGATTCTGGTGCAGGCGGGGCAGAAAGCGTTTACGGGGCCTGATAATAAGCAGGTACCGCTACCTGATTTGCCGCGTGGCACAATTACATTTGATGAAAAATTCAAATTATTGGATCACACCGGTGACCCCATCAAAAACATGCATCTTGAAATCACTAGACCAGATGGTGCAATGACGCATGTAGTTACCGATGATCAAGGTCACATTCCATTACAGCACGGCTTTGATATGGCGCAATTAAAAATTCGTGTTTTAGGCTACGTATAA
PROTEIN sequence
Length: 1055
AALAYASDTRLYAFTLANTEGLTPWLDNNGLLVAAFTSTDQLHAIPHTDMVVLSRRPDLPLHSIIGRAATLHISLANAERSHLNGFITDIQPLSNDGGITRYQLRLSPWLDDLRHVTHSRVWQEQSVQTIVDSVLADYAPRAYWHWSNDAVSLLSALPVRSYCVQYRESDLDFITRLLAEDGLSWRVDQFDVDAPDGHTLVLFSDSTEVGACSAVPFSPAAGLRFAGTGSQQQADSVTALSVAQELLPARVTLASFDYKAKSVLASSVPTQLDVGGTQFKQLPPMERYDYAGMYAFSQSDQAQRHAVLQMQAREARQQVWAGLSTVRSVRAGLRFEIDGHPRLGVAGAVATPKAWVSTQVIQVGINNLPYATHGASSEVLPALVAWLEAQLAVQSQGQGQSQAVTLSTMEVDALAIDPLTAPLAVNTRTLLIASTQRLGYANAFIALPANRPWRPWQSRTLHRLPTMVGSQTARVVGFEGGDGGSAGTGSASVGSASSGSNEQDSSAALLGNDEICCDALGRVRVRFQWQDALDQSGSRASCWVRVAQRSASGGMGSQFLPRIGQEVQVQFMEGDVNRPVVVGALYFGQGEAGVPATPAGLLVDADTSALNQATDHSVSAQSNLTAGYAPAWHGAGVGADAHNNAAAQWGIRSQEYSGSGYNQLVFDDSDGEGRIQLKTTQSGTELNLGHLVHTADNYRGSFRGNGIELRTDAWGGLRAGSGWLITSYGIQHSQSQRQPAADLPAGYGLLSTANTLGASLSQLADSHLSVAIAALKGSSVANASALNDSAAPLPALGKVMQGMVNANQLDAAQNDAAAHNTQADDQHLPHHTDPIISVIAKNDLSMTARQSMQFNAGETLNILNAAESQYTTGGVFRIHSGQAIGLTAGGLKQNATAGLQLIAAQGDTTIQAHNDIISLKAKNNLDMKSAQASIDFAAATEVTLRTAGGACIKIAGGNITVQCPGKILVQAGQKAFTGPDNKQVPLPDLPRGTITFDEKFKLLDHTGDPIKNMHLEITRPDGAMTHVVTDDQGHIPLQHGFDMAQLKIRVLGYV*