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RTP_11222018_0_1um_scaffold_4046_4

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3247..5007

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 595.0
  • Bit_score: 768
  • Evalue 6.30e-219
Transcription-repair-coupling factor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B477_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 595.0
  • Bit_score: 768
  • Evalue 4.50e-219
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 595.0
  • Bit_score: 768
  • Evalue 1.30e-219

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Taxonomy

Sulfuricella denitrificans → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1761
ATGCTGATTAACCACCCCATCCCCCCTGCTGGTCAACGCATTCAAATTGAGGGCTTGGTCGGCTCTGCCGACGCGCTGGCAATTAGCGAGCTGGCTACGCCACACCGTCCTGTCGTCGTACTCACGGCGAACGCACTGGATGCGCAGCGGTTGTTGGATGAAATGCGCTGGTTTGCACCTAAGTTGACGGTAAGTTTGCTGCCCGACTGGGAAACACTGCCTTACGATCACTTTTCACCGCATCAAGATTTGATTTCGGAACGCTTGGCGACGCTATATCAGATTTCACAGAGTCAATGCGATATTGCCATTGTACCAGTGACCACCGCACTCTATCGTCTTACGCCGCCTAGCTACCTTGGTGCGTACACATTTTTTCTGGCACAAGGGCAAAAGCTTGACCTTGATGCGCTACGCAAGCAAATGGCGACTTCCGGCTATACTGCTGTCAGCCAGGTACTGTCACCCGGCGAGTTCAGTGTGCGTGGTGGATTACTGGATTTGTTCCCTATGGGTAGCGCATTGCCGTATCGCATTGATTTATTTGATGATGAGATAGAAAGCATACGTACCTTTGACGTAGATACCCAACGCAGCATTTACCCCGTGAAAGAAATCCGCTTGCTACCTGCGCGAGAGTTTCCGTTGGATGAAGCCGGCATGGCGTTATTTCGACAAAACTTCCGTGATTGCTTTGAAGGTGACGCATCTAAACGCCAGATTTACAAAGATGTCAGCAATGGCCTCGCACCGACGGGGATAGAGTATTACTTACCTCTGTTTTTTGAACAAACCGCGACGCTATTTGATTATGTGCCTGAGCACGCATTAATTTGCTTGCATGGCAATATTGAAGCGGCGACGCAAGAGTTCTGGCGAGACACGGAAACGCGCTACAAACTGATGCGTGGCGACCCGCAGCGTCCGATACTGCCGCCTGCGGATTTATTTTTGGCAACCGATGTGTTATTCGGTCGTCTCAAGCAGTATGCCCGCATAGAAATCGGCACCCACAGTAGCAGCAACACCCTCACCACGCCCCTACCGACACTCAACGTAGAGCGTCGAGAAGCCCAACCTTTACATCGTATCAAAGCATTTCTGGATAGTTTCGCGGGCAATATTTTAATCTTCGCTGAAAGTCTGGGGCGACGTGAAACCATGGCGCAGTATTTCGCAGAACAGGGCATTAAACTCCCGCTCTGTGCAGATTACGCCAGCTGTAGCGACCAGCTCACGGGTGTACGCTTAGGCGTTGCACCGCTTGCGCATGGCTTCATTTTACAATCTGACCCGCCTGTCGCTTACATTACTGAAGCTGAGCTGTACGCCACTACTGTACGCACACGTAATCGCAACAGCCATCGCCGTAGCCAAGTTGATGGCATGTTGCGGGATTTATCTGAAGTCAAAGTCGGTGACCCTGTGGTTCATGCAGATCATGGCATAGGACGCTATTTAGGCTTGGTGAGCATGGACTTGGGTGAGGGTGAAACCGAGTTCTTATTACTCGAATATGCCGGTGATGACAAACTCTATGTACCCGTCTCGCAATTACACCTTATCGGTCGTTACAGCGGTGGTGCGCCAGAATCTATCAGCCTGTCTCGATTAGGGAGTGGCCATTGGGAAAAAGCCAAACGCCGCGCCATGGAGCAGGCGCGGGATACCGCAGCGGAGTTGCTCAATTTATACGCCCGCCGCGCTGCCCGTCAGGGTTATGCATTTAGCTTGAAACAGCATGATTATGAGGCGTTTGTC
PROTEIN sequence
Length: 587
MLINHPIPPAGQRIQIEGLVGSADALAISELATPHRPVVVLTANALDAQRLLDEMRWFAPKLTVSLLPDWETLPYDHFSPHQDLISERLATLYQISQSQCDIAIVPVTTALYRLTPPSYLGAYTFFLAQGQKLDLDALRKQMATSGYTAVSQVLSPGEFSVRGGLLDLFPMGSALPYRIDLFDDEIESIRTFDVDTQRSIYPVKEIRLLPAREFPLDEAGMALFRQNFRDCFEGDASKRQIYKDVSNGLAPTGIEYYLPLFFEQTATLFDYVPEHALICLHGNIEAATQEFWRDTETRYKLMRGDPQRPILPPADLFLATDVLFGRLKQYARIEIGTHSSSNTLTTPLPTLNVERREAQPLHRIKAFLDSFAGNILIFAESLGRRETMAQYFAEQGIKLPLCADYASCSDQLTGVRLGVAPLAHGFILQSDPPVAYITEAELYATTVRTRNRNSHRRSQVDGMLRDLSEVKVGDPVVHADHGIGRYLGLVSMDLGEGETEFLLLEYAGDDKLYVPVSQLHLIGRYSGGAPESISLSRLGSGHWEKAKRRAMEQARDTAAELLNLYARRAARQGYAFSLKQHDYEAFV