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RTP_11222018_0_1um_scaffold_6040_2

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 555..1136

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial biogenesis protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EN63_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 197.0
  • Bit_score: 153
  • Evalue 1.70e-34
Fimbrial biogenesis protein {ECO:0000313|EMBL:ELA00968.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 197.0
  • Bit_score: 153
  • Evalue 2.40e-34
fimT; fimbrial biogenesis protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 186.0
  • Bit_score: 147
  • Evalue 3.50e-33

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Taxonomy

Cupriavidus sp. HMR-1 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCCTAGCCGCCATCATCACCAAGCTGGCTTTACGCTAATTGAGCTGCTGATTGTTATCACGATAATCGGTATTTTATCGGCAGTAGCAATGCCGTCTTTTAGCCAATGGGTACGTGATGCAAAAACCAGAACTGTGGCTGAGGCTATGCAAAATGGCATTAGATTAGCGCAAGTTGAAGCCTTGCGCGGTGGCAGGCCTGTGCAGTTTTTCTTAACCAATGATGCACCAGGCATCAATGCAACGAGCAATGTGAACGGATTAAATTGGGTAGTGCGCACCGTAGATACTTTTCAAAATCCGATAGCATTTGTACAAGGTGGTAGCCTTAGTAGCATTGCGAGCAATACTAGCGTTACTGCCAGTACTACCACGAGCGGTATGATTACCTTTAATTCGATAGGTCGTCTGGTGGCATACACTTCAGGAGCGGCCACGGCGGCGACAGGTGCAAGCTTTCAAATAGTGTCATCGCAAGGTACAAATCCTAGGCAGTTAAATGTAGTCGTTTCTCCCTCAGGTAGTGTGCGAATGTGTGATGCTGCAAAAACGCGCTCTTCAACTGATCCTGATGGTTGCTAA
PROTEIN sequence
Length: 194
MPSRHHHQAGFTLIELLIVITIIGILSAVAMPSFSQWVRDAKTRTVAEAMQNGIRLAQVEALRGGRPVQFFLTNDAPGINATSNVNGLNWVVRTVDTFQNPIAFVQGGSLSSIASNTSVTASTTTSGMITFNSIGRLVAYTSGAATAATGASFQIVSSQGTNPRQLNVVVSPSGSVRMCDAAKTRSSTDPDGC*