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RTP_11222018_0_1um_scaffold_9163_3

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 880..1413

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 177.0
  • Bit_score: 306
  • Evalue 3.20e-81
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 177.0
  • Bit_score: 306
  • Evalue 1.60e-80
Peptide deformylase n=2 Tax=Methylovorus RepID=C6XDN7_METSD similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 177.0
  • Bit_score: 306
  • Evalue 1.10e-80

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Taxonomy

Methylovorus glucosotrophus → Methylovorus → Methylophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCCAATTAAACCAGTATTGCGTATGGGTGACCCGCTCTTATTCGAGGTTGCTACCCCTATAGATCAATTTGATACCCCAGAGTTGCATGCCTTGATTGAGGATATGCAAGACACCATGGCGCATATGCAGGGCGCAGGGATTGCGGCCCCTCAAATTGGCGTAAGCAAGCGCGTGGTAATTTTTGGAGTAGGGCATAACCCACGCTATCCAGATGCTGAGCAAGTACCCTATACCATATTGATTAATCCCGTTTTAAAAACGATTAGCGATGAGACGGATGATGCGTGGGAAGGCTGCTTATCAGTACCAGGCATGCGCGGCTTAGTATCCCGCTATACTCGCTTGCATTACACAGGCTTTGATCAATACGGCAATGCGATTGACCGGTTAGTCAGCGGCTTTCATGCCCGCGTAGTACAGCATGAATGCGATCATCTCGATGGAATTTTATATCCTATGCGCATCAATGACTTGCGGAATTTTGGCTATACAGAAGTACTTTTTCCTGATTTGGAAGTAGCAGACGACTAA
PROTEIN sequence
Length: 178
MPIKPVLRMGDPLLFEVATPIDQFDTPELHALIEDMQDTMAHMQGAGIAAPQIGVSKRVVIFGVGHNPRYPDAEQVPYTILINPVLKTISDETDDAWEGCLSVPGMRGLVSRYTRLHYTGFDQYGNAIDRLVSGFHARVVQHECDHLDGILYPMRINDLRNFGYTEVLFPDLEVADD*