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RTP_11222018_0_1um_scaffold_12342_2

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(866..2113)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Burkholderia sp. WSM4176 RepID=UPI00036AE695 similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 435.0
  • Bit_score: 301
  • Evalue 1.10e-78
Uncharacterized protein {ECO:0000313|EMBL:KIF83242.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 436.0
  • Bit_score: 323
  • Evalue 2.20e-85
lysM; LysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 449.0
  • Bit_score: 200
  • Evalue 7.50e-49

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAATAATGTTCATATTGTCGCAAAAGGTGACAGCCTGAGTAAAATATCCAAGATTTATGGTATTTCAGTAAATGAGCTGAAAAACATTAACAACTTGCCGGACCCAAATAAACTGGATATTGGGCAGTGCATTATGCTCAAAAAAGAAGATGTACTTGGATTTCAATTACTCATACTGGACAAAGATCGCAACCCCATACAAGGATTGGCGTATCGTCTTGAGTCTGTCAGTTTGATGATTAAAGGCATCACAGGAATCGATGGATTAAGTCAGCAAGTCATGACCACCAGCCCGCAGGATAAAGTGCGCATACTGGTAGAGCGCATGGACACATCGCTCAAGGAGATTGCGACTGTAATGTCGGGCTATGGCAATAAACTCGTCACGCTGATTAGCCCCAGCATTAAAATTGAAGCTAAAACAGAACCGCATCCAGATGTAAAACCGGGACAATTGCCGAATAGGCACGACAAACCAAAACCAATTCACGACCCCAAAACCAAGCAACCCCCAAGCACAGGAAAAAAAGACTTGGGACCCAAGACGACGCCTACGAAAACGCCTGATGGGAAACCATTAACCAAGGTGGAAGGGGATATTCCAGATTTGGATTTCTTAACCGGATATACGGGTGAAAAAATCACTGATGCTGATTATGAAAAGGCGGCAGAGGAGCTTGGTTGCGAAGTTGCGGTGATTAAGGCTATTGAGAAAGTTGAATCTGGTGGTAAAACAGGATTCGATAATAATCATAGACCTACAATCCTTTACGAACGACATGTTTTTTCGAGAAATTCTGCTGGACAGTATGATACGAAATATTACGATATTTCTTCGAAAACTGGTTATAAACTTAAGAAAAAAGGGGAGCAAGTCGCAACAATTGAATTGGCTAATGATTACTATGCACCTACATCAGTTGTAAACTATAAACGGTTAGCTAAAGCTTATCAACTAGATGAGGAAGCAGCATTGAAAGCATGTTCTTGGGGTAAGTTTCAGGTACTTGGGGAAAATTATAAGGCTATAGGATTTAATTCGGTTCGAGAGATGGTTGATGCTCATGTTAAAGGACAAAAGGGTCACTTAAAAGCATTTGTTGGTTATATTAAAAGCAAAAAACTACAACATGCTCTTAAAGACAAAAACTGGGCCGTCATTGCTAAAGGATATAATGGAAAAGGCTATAAAAAATTTCATTATGATGAAAGGATTAAAGCGGAATATGAAAAAATTAAAAATTAA
PROTEIN sequence
Length: 416
MNNVHIVAKGDSLSKISKIYGISVNELKNINNLPDPNKLDIGQCIMLKKEDVLGFQLLILDKDRNPIQGLAYRLESVSLMIKGITGIDGLSQQVMTTSPQDKVRILVERMDTSLKEIATVMSGYGNKLVTLISPSIKIEAKTEPHPDVKPGQLPNRHDKPKPIHDPKTKQPPSTGKKDLGPKTTPTKTPDGKPLTKVEGDIPDLDFLTGYTGEKITDADYEKAAEELGCEVAVIKAIEKVESGGKTGFDNNHRPTILYERHVFSRNSAGQYDTKYYDISSKTGYKLKKKGEQVATIELANDYYAPTSVVNYKRLAKAYQLDEEAALKACSWGKFQVLGENYKAIGFNSVREMVDAHVKGQKGHLKAFVGYIKSKKLQHALKDKNWAVIAKGYNGKGYKKFHYDERIKAEYEKIKN*