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RTP_11222018_0_1um_scaffold_12342_4

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2417..4573)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036694C9 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 749.0
  • Bit_score: 691
  • Evalue 6.60e-196
Type VI secretion system, Rhs element Vgr family {ECO:0000313|EMBL:ELX11460.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 742.0
  • Bit_score: 655
  • Evalue 7.30e-185
vgr; VGR-related type VI secretion system protein similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 750.0
  • Bit_score: 630
  • Evalue 3.90e-178

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Taxonomy

Janthinobacterium sp. HH01 → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2157
TACTGGTTCACCCACACAGCTGACCCCACCAGTCCACATCTGGGTAGCCACACCTTAATCATCGCTGATCATAATCAGGCCTTCACCGCCAATCCCCAGGCTACTGTCCGCTACACCCAATCAGGTACCGTCTTGCCTGAAGACAGCATAGACCAGTGGCGTGACCGCTATCAAGCTGCCCCGCATCGGGTCGAGACCGTCACCTGGGATTACCGCGCCAACAAAATCCACCACAGCAGCTATGAAGATCCCAGCCCCAGCGCACAGTCACACCGTAAAAACACCGGCGTCACCCTTACCTACTACGACACCCCCGGTCAATACGCCTATCACGACAGCAGTCAAGGTGAACGGTATGCCAAAATCGCGATGGATGCTATCCACACCCAACGCCACCATATCAGTGCCGCAGGCACCGTACGAACTGCCAGTCCGGGTAGCTATATTACCCTGAGTGACTACCCCGGCTACGCTTACCTCGACACCCGTGATAATGAAGCGACCACCACATTCATGATCACGCAGGTAACACATCAGGCGCACAACAACCTCATCGCCCACCAGCGTCATGACAGCGCCGACAACAACCAACAGTCACGCTACCGCAATACACTCACCCTCATTCCCGACACCACCACCTACCGTCCCCCAAGCACCCAGCAAGGCAAACACCTCCACCCCAAACCTACCGTCCAGGGTCAGCAGACAGCCATCGTCGTCGGCGACAACAACGGCCCCATCCACACCGACCGCGACCACCGCATCAAAGTGCAGTTCCACTGGCAACGCGGCGACCAGAGCCACAGCCGCTTGAGCCACCCCTATGCTGACGACCACAGCGCAGCCCCAGGAGACGGCAGCAATGGTACCTGGGTACGTGTAGCCGCCAATTTAGCCCCCACCGCGGGTGATAACTGGGGCAGCGTCCAGCTGCCAAGACTCGGGCAAGAAGTATTGGTTGATTTCCTTGACGGCGACATCGACCGTCCTGTGGTGATAGCCAGCCTCTACAACGGACTGGGGCAGGATAACGCTGCTCACAATCAGATAGCAGGCACCGCCCCCACTGCCACCGCCGCTGCCCCCAGCTGGTTTACCGGCAGCGAGGACGGTCACAACCACGCCGCCACCCTGTCTGGTATCAAAACCCAACAACTCAACAGCAGCCAGAGCGGCACTGGCGGCTACAACCAGCTCGTGTTTGACGACACTGCCAACCAGTCCCGCATCAGCCTGCAACAGCACGAAGCCCGGCACACCGGCGACAGTGAACTCAACCTCGGTCAGCTCACCCACCAGAGCGACAACCAACGCCTCAACCCCACAGGACACGGTCTTGAACTCAAAACCCGCCACAGTGCCGCCATTAGAGCCGGCAGCGGGCTACTCATCAGCAGCGAACGCACATCCGTCAATGGTATGCAGATGGACAGCAGACCAGCACAAACCATCATCAGCCGCCAGCATGACCTCAACACCGCCCTTGCCCAGGCTGCCGACACCCATCACGCCAAAGGCACAACTGACCCAACAGCTGACAAACAAACCGCGATCAAACAACTAGATCACAGCCAAAAAGTCATCAGCCAGCAAACCAGCCAAGGTACAAATAGCAGCGGCAGCAGCAACGACATCACGACCTACAGCGAACCGCACCTGCAACTGGAAAGCCCGGCAGGGATAATAGCTGCCACAGCGACTAACGCAGTAATCAGTGCAGGCACCACCACCAGCCTCACTGCAGAGCAGGACATCAGCGTCAGCAGTCAGGCGCAGCAACACCACATTATAAAAGATGGCATCCGGCTCTTCACCCAGGGGATTGCAACAAACAAGACCAAGCCCAATCAGGAAACCGGCATCAAGCTCCACGCCGCGCAGGGCAAACTCAGCAGCCAGAGCCAGTCCGGCAACACACACATTAACGCCAGCAAAGACGTGCATATTGCCAGCACCGAACAAACCATCACCATCGCGGCACCGCAACATTTGCTACTGACATCGGGTGGCGCGTACATCAGGCTTGAGGGCGGCAATATTGATGTGCATGGGCCTGGGGTGATGGCGTTTAAGGGGAGTTTGAGCGAGTTGGCGGGGCCGGGAGGTGGCAGTGCCGATGCCATTAGCCTACCCAAAGCAGCGCCTATTGTCCATTAG
PROTEIN sequence
Length: 719
YWFTHTADPTSPHLGSHTLIIADHNQAFTANPQATVRYTQSGTVLPEDSIDQWRDRYQAAPHRVETVTWDYRANKIHHSSYEDPSPSAQSHRKNTGVTLTYYDTPGQYAYHDSSQGERYAKIAMDAIHTQRHHISAAGTVRTASPGSYITLSDYPGYAYLDTRDNEATTTFMITQVTHQAHNNLIAHQRHDSADNNQQSRYRNTLTLIPDTTTYRPPSTQQGKHLHPKPTVQGQQTAIVVGDNNGPIHTDRDHRIKVQFHWQRGDQSHSRLSHPYADDHSAAPGDGSNGTWVRVAANLAPTAGDNWGSVQLPRLGQEVLVDFLDGDIDRPVVIASLYNGLGQDNAAHNQIAGTAPTATAAAPSWFTGSEDGHNHAATLSGIKTQQLNSSQSGTGGYNQLVFDDTANQSRISLQQHEARHTGDSELNLGQLTHQSDNQRLNPTGHGLELKTRHSAAIRAGSGLLISSERTSVNGMQMDSRPAQTIISRQHDLNTALAQAADTHHAKGTTDPTADKQTAIKQLDHSQKVISQQTSQGTNSSGSSNDITTYSEPHLQLESPAGIIAATATNAVISAGTTTSLTAEQDISVSSQAQQHHIIKDGIRLFTQGIATNKTKPNQETGIKLHAAQGKLSSQSQSGNTHINASKDVHIASTEQTITIAAPQHLLLTSGGAYIRLEGGNIDVHGPGVMAFKGSLSELAGPGGGSADAISLPKAAPIVH*