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RTP_11222018_0_1um_scaffold_13424_1

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 1..1785

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor (TRCF) (ATP-dependent helicase Mfd) {ECO:0000313|EMBL:CBI10599.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBI10599.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 593.0
  • Bit_score: 930
  • Evalue 7.50e-268
Transcription-repair-coupling factor (TRCF) (ATP-dependent helicase Mfd) n=1 Tax=mine drainage metagenome RepID=E6QTM7_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 593.0
  • Bit_score: 930
  • Evalue 5.30e-268
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 593.0
  • Bit_score: 911
  • Evalue 1.20e-262

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1785
CATTGGGAAAAAGCCAAACGCCGCGCCATGGAGCAGGCGCGGGATACCGCAGCGGAGTTGCTCAATTTATACGCCCGCCGCGCTGCCCGTCAGGGTTATGCATTTAGCTTGAAACAGCATGATTATGAGGCGTTTGTCGAAGGTTTTGGTTTTGAAGAAACGCTAGACCAAGCCAGCGCGATTACCGCCGTTATTGCCGACTTATGTTCACCCCGCCCGATGGATAGACTGGTATGTGGTGACGTCGGTTTTGGCAAAACCGAAGTTGCCTTACGCGCTGCATTTGTTGCGCTGATGGATGGTAAACAAGTCGCGGTACTCGTCCCCACTACTTTGCTGGCAGAACAGCATTTCCAGAATTTTTCTGACCGTTTTGCCGATTGGCCCGTACGCATCGCTGAATTGTCACGATTCCGCTCTGCCAAAGAACAAACACTCGCCTTGGCGGGTTTGGCAGCAGGCACAATAGACATCGTCATTGGTACCCATAAACTACTGCAAAAAGATGTGATATTCAAGAATTTAGGATTGGTCATTATCGATGAGGAGCACCGTTTTGGCGTGCGCCAAAAAGAACAAATGAAGGTATTGCGCGCCGATGTCGATGTGCTCACCCTCACTGCCACACCGATACCGCGCACACTGGCAATGTCGCTGGAAGGAATACGCGATTTTTCGGTGATTACCACACCACCGCAAAAACGACTATCGATTAAAACCTTTGTATCACGCTATTCTGACGGTGTTATCCGTGAAGCAGTATTGCGTGAACTCAAGCGGGGTGGGCAAATATACTTCTTGCACAACGAAGTCGATACTATTTACAACATGGAAGCGCGATTGGCAAAGCTGCTGCCCGAAGCTCGCATCCGTGTCGCCCACGGGCAAATGCCTGAACGTGAACTGGAACACGTCATGCGTGATTTCCATCAACAGCAGGTCAATATCCTGTTGTGCACCACCATCATCGAAACCGGGATAGACATCCCCACCGCCAACACCATTATCATGAACCGTGCCGATAAATTCGGCTTGGCACAATTGCATCAATTACGCGGTCGAGTTGGACGCTCACATCATCAGGCCTACGCCTATTTGCTCACGCCTGAGGAAGATGCTATCACCCCTGCCGCTAAAAAACGATTAGAAGCCCTGCAAATGATGGAAGACCTCGGTGCAGGTTTTCAACTGGCGATGCACGATCTGGAAATACGGGGCGCGGGTGAAGTATTGGGTGATTCACAAAGTGGCAGCATGCAGGAAATCGGCTTTAGCATGTACAACGACATGCTTAACCATGCCGTCGCCGCGCTGAAAAAAGGCTTGGAGCCAGACATGAATCAGCCACTGGGCGTGACCACAGAAATCAATCTACACACCCCTGCGCTCCTGCCGAACACCTATTGTGGCGATATTCATGAGCGCTTAGTCATTTACAAACGCTTCGCCAACTGCACCGAACAAGACACGCTCGATGACCTGCATGCCGAACTAGTTGACCGTTTCGGTTTATTACCCGAACCCGCGCAAGCCTTGCTTGAATCGCATCGCCTGCGGCTACTTGCCAAGCCACTGGGCATTGCTAAGTTAGACGCATCGAATGAAACCATAGGCTTGCAATTTATCACCAAACCGCCCATAGATCCGCTACGCCTGATAGAATTAATCCAGACTCGGCGTCATTACAAACTGGCAGGCCCCGACAAACTACGTATTACCATCGCCAGCAAAGACCTTACTGAGCGCGTTAAAAACATTCGTAACCTATTGAAAGAACTGAGCTGA
PROTEIN sequence
Length: 595
HWEKAKRRAMEQARDTAAELLNLYARRAARQGYAFSLKQHDYEAFVEGFGFEETLDQASAITAVIADLCSPRPMDRLVCGDVGFGKTEVALRAAFVALMDGKQVAVLVPTTLLAEQHFQNFSDRFADWPVRIAELSRFRSAKEQTLALAGLAAGTIDIVIGTHKLLQKDVIFKNLGLVIIDEEHRFGVRQKEQMKVLRADVDVLTLTATPIPRTLAMSLEGIRDFSVITTPPQKRLSIKTFVSRYSDGVIREAVLRELKRGGQIYFLHNEVDTIYNMEARLAKLLPEARIRVAHGQMPERELEHVMRDFHQQQVNILLCTTIIETGIDIPTANTIIMNRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEEDAITPAAKKRLEALQMMEDLGAGFQLAMHDLEIRGAGEVLGDSQSGSMQEIGFSMYNDMLNHAVAALKKGLEPDMNQPLGVTTEINLHTPALLPNTYCGDIHERLVIYKRFANCTEQDTLDDLHAELVDRFGLLPEPAQALLESHRLRLLAKPLGIAKLDASNETIGLQFITKPPIDPLRLIELIQTRRHYKLAGPDKLRITIASKDLTERVKNIRNLLKELS*