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RTP_11222018_0_1um_scaffold_38565_3

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(926..1165)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Methylotenera RepID=UPI0003712262 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 77.0
  • Bit_score: 120
  • Evalue 6.60e-25
UPF0060 membrane protein SSKA14_2633 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 75.0
  • Bit_score: 119
  • Evalue 2.10e-24
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 75.0
  • Bit_score: 118
  • Evalue 7.10e-25

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Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GGCTCTGTTCTGCTTTTAATCCCAGCCGCGCTTAGCCTTGCCTTATTCGCTTGGTTACTCACGCTTCACCCCACAGCTGCTGGGCGAATTTATGCTGCTTATGGGGGTGTCTATATTGGGGTTGCAGTGATGTGGCTGTGGTTGGTTGAGTCAATTAAGCCCTCTACCACTGATTTAGTTGGGGCGCTGGTCTGTTTTATCGGCATGGCAATCATCATTACAGGCTCCAGTCATACCTGA
PROTEIN sequence
Length: 80
GSVLLLIPAALSLALFAWLLTLHPTAAGRIYAAYGGVYIGVAVMWLWLVESIKPSTTDLVGALVCFIGMAIIITGSSHT*