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SR-VP_26_10_2019_2_100cm_scaffold_2952_1

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(2..622)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL3_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 207.0
  • Bit_score: 248
  • Evalue 4.20e-63
rpl3p; 50S ribosomal protein L3P similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 207.0
  • Bit_score: 248
  • Evalue 1.20e-63
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 207.0
  • Bit_score: 364
  • Evalue 9.70e-98

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Taxonomy

Sequences

DNA sequence
Length: 621
ATGTCACATCCCCACAGACCAAGGCGCGGATCAATTGCATACAGCCCGCGAGTAAGAGCAAGAAGTGAAACACCCCGTGTAAGAGCGTGGCCTCTGATAAAAGAGCCCAAGCTGTTAGGATTTGCAGGTTATAAGGCCGGCATGACGCATCTGGTTATGAGAGATGACGCCCCGAACAGCCTGACCACAGGGATGGAAATTTCAGTACCGGTAACCATTATGGAAGCCCCTGCAATGAAAATTGCAGCTATCCGGGTTTATAAAAATACTACTTATGGCTCAAGCGCAATAGCCGAAGCATGGACAACCGAACTTGATAAGGAACTTAACCGGGCCATCACGGTCCCGAAGAAACATGACCTTCCGGCGGCACTTGCCAAAATAGAGCAGCTTATAAAAGACGGCGTTGCCAGGGATTTAAGAGTAATAATGTACACTCTGCCTGAGAAGGTAACTGGCATCCCCAAGAAAAAACCCGAAATCATGGAAAACAATATCGGTGGTACTGATTTGAAAGCACGGTTTGATTATGCAAAGACCATTCTGGGCAAAAATGTCAGTATAAATGATGTATTCAAGAACGGCGACATTATCGATGTTCTTGGCATAACAATAGGAAAA
PROTEIN sequence
Length: 207
MSHPHRPRRGSIAYSPRVRARSETPRVRAWPLIKEPKLLGFAGYKAGMTHLVMRDDAPNSLTTGMEISVPVTIMEAPAMKIAAIRVYKNTTYGSSAIAEAWTTELDKELNRAITVPKKHDLPAALAKIEQLIKDGVARDLRVIMYTLPEKVTGIPKKKPEIMENNIGGTDLKARFDYAKTILGKNVSINDVFKNGDIIDVLGITIGK