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SR-VP_26_10_2019_2_100cm_scaffold_1760_30

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: comp(23878..24369)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 130.0
  • Bit_score: 119
  • Evalue 3.30e-24
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RLME_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 128.0
  • Bit_score: 116
  • Evalue 2.00e-23
ribosomal RNA methyltransferase RrmJ/FtsJ similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 128.0
  • Bit_score: 116
  • Evalue 5.60e-24

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 492
GTCGACGGTCGCGCCGGGGCCGGTGAGTCTGACAATGGCCGGCGGCTTGCCCTCCGTACGAAAATCGTCGCGGTCGATCTCCAGCCGATGCAGCCACTGCCGGGCGTACAGACGGTCCAAGCTGACATTACGCGCGCGGAAACAATAGCCAAGATCGAGGAGGTTATTCCAGAAGGCGCAGACTTGGTGCTGTCTGACGTCGCGCCCGCGGCATCCGGAGTTCGGTTTGTCGATCATGCACGGTCGATCCAACTCGCGGAGGCGTCCCTGACGATCGCGCTGCATTTCTTGAAAGCGAATGGCGCGTTTGTCGTCAAAGTATTCCAGGGTGAAGATGTCTCGGATTTCGTCACGCGGACTAGGCAGAGTTTTGAGATGGTGCGGGTTTTTCGTCCTCAAGCTTCACGCCGGGAAAGCGATGAGCAATACATCGTCTGTCTGCAGTTGCATAAAGAACGGATGGACCTGCCAGCACCGAACGATGCGGCATAA
PROTEIN sequence
Length: 164
VDGRAGAGESDNGRRLALRTKIVAVDLQPMQPLPGVQTVQADITRAETIAKIEEVIPEGADLVLSDVAPAASGVRFVDHARSIQLAEASLTIALHFLKANGAFVVKVFQGEDVSDFVTRTRQSFEMVRVFRPQASRRESDEQYIVCLQLHKERMDLPAPNDAA*