ggKbase home page

SR-VP_26_10_2019_2_90cm_scaffold_25064_3

Organism: SR-VP_26_10_2019_2_90cm_Methanoperedens_44_8

partial RP 10 / 55 BSCG 4 / 51 ASCG 3 / 38 MC: 1
Location: 805..1494

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D1C03D related cluster n=1 Tax=unknown RepID=UPI0003D1C03D similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 230.0
  • Bit_score: 255
  • Evalue 3.80e-65
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 230.0
  • Bit_score: 378
  • Evalue 5.50e-102
SSU ribosomal protein S4e similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 227.0
  • Bit_score: 249
  • Evalue 7.80e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 690
ATGGGAAGACATCAGAAAAGAGTGGCAGCACCAACATCATGGCCGATTACGAGAAAGACGCATCACTGGGTGGTTGGAGCCAATGCGGGACCTCATTCGAAGGAAACCGGGATTCCACTGCTTGTGGTTGTCCGTGACATGCTCAAACTCGCGAACAACAGCAGGGAAGCCAGACGAATAATTAACGAAGGGACTATTTTCGTTGACGGCAAAGCAAGAACTGATTATAAATACATTATCGGTCTTTTCGATATAGTATCAATTCCTGCAACCAACGAATATTATCGCGTCCTTCTGGATAAACAGAACAGGTTCAAACTGTATAAAGAAGATGCTGGCGCCATGAAGCTGTGCAGAATCAACAACAAAACTATTGTGAAAAAAGGAACGGTGCAGCTCAACCTGCATGACGGAAGCAATATCCTGGCGTCCAATGATTACAAGACTTTTGATACCGTCCTTCTGGGAGAAAACCGCGAGATTGCGAAACACATAGCATATAAGCCAGGAAATCTTGCAATGGTTGTGGGAGGAGAACATTCAGGTGAGATTGGAAAGATAAAACAAATCCGCAAAGTCAGGGGTTCTGGGACAAACATGGTAGCAATATCCAATGAAGGGGAATTTGAGACCATTGAAAATTATGTGTTTGTTATAGGCGAATCCGCCCCTGAAATCAAGGTGATATGA
PROTEIN sequence
Length: 230
MGRHQKRVAAPTSWPITRKTHHWVVGANAGPHSKETGIPLLVVVRDMLKLANNSREARRIINEGTIFVDGKARTDYKYIIGLFDIVSIPATNEYYRVLLDKQNRFKLYKEDAGAMKLCRINNKTIVKKGTVQLNLHDGSNILASNDYKTFDTVLLGENREIAKHIAYKPGNLAMVVGGEHSGEIGKIKQIRKVRGSGTNMVAISNEGEFETIENYVFVIGESAPEIKVI*