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SR-VP_9_9_2021_75_5A_0_95m_Atabeyarchaeota_47_71

SR-VP_9_9_2021_75_5A_0_95m_unknown_47_71
In projects: SR-VP_9_9_2021_75_5A_0_95m  |  SRVP_asgard

Consensus taxonomy:

Description

SR-VP_9_9_2021_75_5A_0_95m_metabat2_16428 - maybe close to Ata-1 and the nanopore circ 10068 contig (J)

Displaying items 1-50 of 163 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SR-VP_9_9_2021_75_5A_0_95m_scaffold_121
Domain: Archaea (60.67%)
89 81528 bp 46.00 71.58 84.27
SR-VP_9_9_2021_75_5A_0_95m_scaffold_17 78 83102 bp 45.88 68.90 85.30
SR-VP_9_9_2021_75_5A_0_95m_scaffold_34
Domain: Archaea (70.42%)
71 66420 bp 46.30 73.71 86.34
SR-VP_9_9_2021_75_5A_0_95m_scaffold_33
Domain: Archaea (61.43%)
70 66806 bp 45.99 71.21 84.36
SR-VP_9_9_2021_75_5A_0_95m_scaffold_53 63 58406 bp 47.77 70.05 82.62
SR-VP_9_9_2021_75_5A_0_95m_scaffold_66
Domain: Archaea (70.18%)
57 54199 bp 45.58 73.80 89.34
SR-VP_9_9_2021_75_5A_0_95m_scaffold_117
Domain: Archaea (53.7%)
54 45001 bp 44.81 71.62 80.03
SR-VP_9_9_2021_75_5A_0_95m_scaffold_41 54 61464 bp 45.62 69.96 88.60
SR-VP_9_9_2021_75_5A_0_95m_scaffold_47 53 60395 bp 47.13 69.27 83.87
SR-VP_9_9_2021_75_5A_0_95m_scaffold_88 53 49677 bp 46.06 68.20 83.37
SR-VP_9_9_2021_75_5A_0_95m_scaffold_91 52 48965 bp 46.20 68.63 81.76
SR-VP_9_9_2021_75_5A_0_95m_scaffold_85 48 50097 bp 47.36 71.61 84.48
SR-VP_9_9_2021_75_5A_0_95m_scaffold_160 45 39568 bp 46.25 69.08 75.66
SR-VP_9_9_2021_75_5A_0_95m_scaffold_95 45 47736 bp 47.03 71.91 84.95
SR-VP_9_9_2021_75_5A_0_95m_scaffold_207
Domain: Archaea (81.82%)
44 34005 bp 46.31 71.66 88.47
SR-VP_9_9_2021_75_5A_0_95m_scaffold_144 43 42591 bp 47.42 69.46 80.50
SR-VP_9_9_2021_75_5A_0_95m_scaffold_123 42 44402 bp 47.31 70.87 84.05
SR-VP_9_9_2021_75_5A_0_95m_scaffold_162
Domain: Archaea (54.76%)
42 39155 bp 47.09 69.42 82.72
SR-VP_9_9_2021_75_5A_0_95m_scaffold_226 41 35720 bp 46.97 72.64 86.76
SR-VP_9_9_2021_75_5A_0_95m_scaffold_93
Domain: Archaea (56.1%)
41 48161 bp 45.92 72.72 85.80
SR-VP_9_9_2021_75_5A_0_95m_scaffold_223 39 32824 bp 47.72 67.42 82.57
SR-VP_9_9_2021_75_5A_0_95m_scaffold_232 38 32214 bp 46.54 69.59 84.29
SR-VP_9_9_2021_75_5A_0_95m_scaffold_150 37 40799 bp 46.11 70.66 85.18
SR-VP_9_9_2021_75_5A_0_95m_scaffold_428 37 36775 bp 45.70 70.00 85.06
SR-VP_9_9_2021_75_5A_0_95m_scaffold_198 36 34430 bp 48.14 69.30 82.47
SR-VP_9_9_2021_75_5A_0_95m_scaffold_169 35 37496 bp 46.94 71.60 88.89
SR-VP_9_9_2021_75_5A_0_95m_scaffold_265 35 30777 bp 48.39 71.70 77.19
SR-VP_9_9_2021_75_5A_0_95m_scaffold_390 33 35415 bp 46.18 71.27 85.50
SR-VP_9_9_2021_75_5A_0_95m_scaffold_234
Domain: Archaea (57.58%)
33 32026 bp 46.47 71.77 89.74
SR-VP_9_9_2021_75_5A_0_95m_scaffold_253 33 30729 bp 46.22 71.92 86.63
SR-VP_9_9_2021_75_5A_0_95m_scaffold_197
Domain: Bacteria (50%)
32 34506 bp 46.99 70.51 87.21
SR-VP_9_9_2021_75_5A_0_95m_scaffold_378
Domain: Archaea (73.33%)
30 24260 bp 45.72 75.66 87.95
SR-VP_9_9_2021_75_5A_0_95m_scaffold_288
Domain: Archaea (60%)
30 28503 bp 46.00 74.12 85.48
SR-VP_9_9_2021_75_5A_0_95m_scaffold_195 28 34838 bp 46.64 71.73 87.34
SR-VP_9_9_2021_75_5A_0_95m_scaffold_267
Domain: Archaea (53.57%)
28 29880 bp 46.62 72.88 88.05
SR-VP_9_9_2021_75_5A_0_95m_scaffold_274
Domain: Archaea (53.57%)
28 29610 bp 46.72 69.67 89.65
SR-VP_9_9_2021_75_5A_0_95m_scaffold_402 27 23011 bp 47.21 69.33 82.72
SR-VP_9_9_2021_75_5A_0_95m_scaffold_341
Domain: Archaea (77.78%)
27 25617 bp 46.58 74.83 84.13
SR-VP_9_9_2021_75_5A_0_95m_scaffold_362
Domain: Archaea (55.56%)
27 24665 bp 45.99 71.75 86.94
SR-VP_9_9_2021_75_5A_0_95m_scaffold_322
Domain: Archaea (65.38%)
26 26577 bp 46.21 73.22 87.36
SR-VP_9_9_2021_75_5A_0_95m_scaffold_340 26 25672 bp 47.67 68.94 88.99
SR-VP_9_9_2021_75_5A_0_95m_scaffold_205
Domain: Archaea (52%)
25 34094 bp 47.39 71.30 89.22
SR-VP_9_9_2021_75_5A_0_95m_scaffold_370
Domain: Archaea (54.17%)
24 24506 bp 46.56 68.66 83.75
SR-VP_9_9_2021_75_5A_0_95m_scaffold_493 24 20418 bp 46.58 69.40 82.27
SR-VP_9_9_2021_75_5A_0_95m_scaffold_343 24 25451 bp 46.43 74.49 89.94
SR-VP_9_9_2021_75_5A_0_95m_scaffold_377 23 24294 bp 45.93 69.22 84.82
SR-VP_9_9_2021_75_5A_0_95m_scaffold_363
Domain: Archaea (56.52%)
23 24660 bp 45.97 71.67 86.74
SR-VP_9_9_2021_75_5A_0_95m_scaffold_466
Phylum: Bathyarchaeota (54.55%)
22 21074 bp 46.87 75.54 77.72
SR-VP_9_9_2021_75_5A_0_95m_scaffold_518 22 19852 bp 46.69 68.37 82.10
SR-VP_9_9_2021_75_5A_0_95m_scaffold_307 21 27249 bp 46.71 71.86 90.61
Displaying items 1-50 of 163 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.