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SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_maxbin2_449

SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_Archaea_48_4
In projects: SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META  |  circ_rRNA_paper_related

Consensus taxonomy: Archaea

Displaying 16 items
contig # features sequence size GC content (%) Cov Coding Density (%)
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_5652_L
Domain: Archaea (56.33%)
332 309328 bp 48.15 3.32 76.02
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_4333_L
Domain: Archaea (61.59%)
276 247582 bp 48.49 3.74 79.22
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_3211_L
Domain: Archaea (66%)
250 219032 bp 48.24 3.97 79.93
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_8064_L
Phylum: Bathyarchaeota (52.67%)
243 226518 bp 48.12 4.24 81.44
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_2822_L
Domain: Archaea (58.15%)
227 196474 bp 48.15 3.86 78.86
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_10279_L
Domain: Archaea (54.08%)
196 171446 bp 46.86 4.18 81.95
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_13857_L
Species: RBG_13_Bathyarchaeota_46_16b_curated (50.68%)
148 109495 bp 48.48 2.16 79.08
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_9491_L
Phylum: Bathyarchaeota (61.38%)
145 129196 bp 48.76 2.88 79.42
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_11900_L
Domain: Archaea (53.28%)
137 164039 bp 49.06 4.22 74.40
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_19273_L 53 35747 bp 49.52 4.10 85.69
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_30448_L
Species: RBG_13_Bathyarchaeota_46_16b_curated (74.42%)
43 29234 bp 49.36 4.50 74.44
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_31900_L
Phylum: Bathyarchaeota (50%)
42 32996 bp 47.34 2.93 79.31
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_9995_L 32 34577 bp 48.94 2.50 82.73
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_32746_L
Species: RBG_13_Bathyarchaeota_46_16b_curated (63.33%)
30 23066 bp 48.05 2.10 81.60
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_21235_L 27 21855 bp 45.83 4.13 62.43
SR-VP_9_9_2021_81_5A_0_75m_PACBIO-HIFI_HIFIASM-META_33960_L
Domain: Archaea (57.14%)
14 14482 bp 48.89 0.95 83.94
Displaying 16 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.