ggKbase home page

SRVP18_trench_6_60cm_scaffold_15546_2

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: comp(393..908)

Top 3 Functional Annotations

Value Algorithm Source
AP endonuclease, family 2 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTP6_METCG similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 170.0
  • Bit_score: 201
  • Evalue 6.40e-49
AP endonuclease similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 170.0
  • Bit_score: 201
  • Evalue 1.80e-49
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 170.0
  • Bit_score: 312
  • Evalue 2.80e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 516
ATGACAAGATGTCTTGAAAGGGCGTCGGATTTTGTTGAGCTTGCCGTAGTTCATCCTGGACATCTCTCGCCTCTGGGGATGCAGCTTCCCGATATGGCATGGCAGCAGAGTATCGAAGGCTTAAAGGAAATCTGTGATTTTGCTGACGATCTTGGAATTAAGATCGGAGTGGAAAATATGCCCAACATGCAGCATATTTTTGGGAAAAGACCCGGTGAGCTCCTTGGCATGATAGAATCCCTGGAACGCGGTAACGCGGGTTTGACGCTGGACATTGGACACGCCAATACCAACGGCCTTGTTTTCGATTTCCTGGAGGATCTTGGAAAAGTGATACATGTTCACCTCCATGATAACAAAGGAAGAAGCGATGAGCATCTTGAACTCGGAAAAGGAAATATTAACTGGAAAGAGGTCATCCCGAAATTCAAGGGATATAAAGGCAGGTTCGTTACCGAAGCCAGAACGGTAGAAGAAGGGACTGCAAGTTTGAAATACCTTAATAGTATTAAATAA
PROTEIN sequence
Length: 172
MTRCLERASDFVELAVVHPGHLSPLGMQLPDMAWQQSIEGLKEICDFADDLGIKIGVENMPNMQHIFGKRPGELLGMIESLERGNAGLTLDIGHANTNGLVFDFLEDLGKVIHVHLHDNKGRSDEHLELGKGNINWKEVIPKFKGYKGRFVTEARTVEEGTASLKYLNSIK*