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sw_10_scaffold_17152_2

Organism: SW_10_UNK

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Location: comp(193..1116)

Top 3 Functional Annotations

Value Algorithm Source
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 307.0
  • Bit_score: 523
  • Evalue 4.90e-146
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 307.0
  • Bit_score: 523
  • Evalue 2.40e-145
DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN2_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 307.0
  • Bit_score: 522
  • Evalue 3.90e-145

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 924
GTGTTCGTCAACGAGGTGGCGACGCTGGCGATGCGGGCCATCATGCACGTCGGGTTCTCGATCGGCATCGACGACGAGTCCATCGAGCGGGACGCCGAAGAGCAGATCACCGAGGCCATCGACAGCGCCTACGACCGGGTCAACGACCTCATCGAGGCCTACCGGGCCGGCGAACTCGAGAGCCTGCCGGGACGGACGGTCGACGAGACCCTGGAGATGAAGATCATGCAGACGCTCGGAAAGGCGCGCGACTCCGCGGGCGACATCGCCGACGACCACTTCGGCGACGACAACCCCGCGGTGGTCATGGCCCAGTCCGGCGCCCGTGGGTCGATGCTGAACCTGACCCAGATGGCCGGCTGCGTGGGCCAGCAGGCGGTCCGCGGCGAGCGCATCAACCGCGGTTACGAGGACCGCACGCTGAGCCACTTCAAGCCGAACGACCTGTCGGCCGACGCCCACGGCTTCGTGGAGAACTCCTACCGGAACGGCCTGACGCCGCGGGAGTTCTTCTTCCACGCGATGGGCGGCCGCGAGGGGCTGGTCGACACCGCCGTCCGGACGTCGAAATCCGGCTACCTCCAGCGCCGGCTCATCAACGCGCTGTCGGAGCTGGAGGCCCAGTACGACGGCACCGTCCGGGACACCTCCGACACCGTCGTCCAGTTCGAGTTCGGCGAGGACGGCACCTCGCCGGTCCGGGTCTCCTCCGACGACGACTCCGACATCGACGTCGAGTCCATCACCGACCGCGTCGTCGACGAGGAGTTCGACTCGGAGGCCGAAAAGCGGGAGTTCCTCGGCATCGAGGCGCCGACGACCAACCTCTCGGAGCACGGCGAGTCGTGGCGCTCCGCCGGCGACACCGAGTTCGAGCCGGATCCGGACGCCGGGGCGGAGCCGGAGGTGGAGTCCGATGACTGA
PROTEIN sequence
Length: 308
VFVNEVATLAMRAIMHVGFSIGIDDESIERDAEEQITEAIDSAYDRVNDLIEAYRAGELESLPGRTVDETLEMKIMQTLGKARDSAGDIADDHFGDDNPAVVMAQSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHFKPNDLSADAHGFVENSYRNGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTSDTVVQFEFGEDGTSPVRVSSDDDSDIDVESITDRVVDEEFDSEAEKREFLGIEAPTTNLSEHGESWRSAGDTEFEPDPDAGAEPEVESDD*