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sw_10_scaffold_1527_3

Organism: SW_10_Nanohaloarchaea_44_10

near complete RP 34 / 55 MC: 8 BSCG 20 / 51 MC: 4 ASCG 34 / 38 MC: 4
Location: comp(2744..3304)

Top 3 Functional Annotations

Value Algorithm Source
TATA-box-binding protein; K03120 transcription initiation factor TFIID TATA-box-binding protein id=18316009 bin=Nanosalinarum tax=Nanosalinarum similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 188.0
  • Bit_score: 333
  • Evalue 1.20e-88
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 187.0
  • Bit_score: 333
  • Evalue 1.70e-88
TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 206
  • Evalue 8.00e-51

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Taxonomy

Candidatus Nanosalinarum sp. J07AB56 → Candidatus Nanosalinarum → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 561
ATGAGCGAAGACGCTTTTGAAGACGAAAACATCAAGATTGAAAACGTAGTAGCCTCCACAACCCTCGACAGGAGAATGCCTCTCGACAGGATCGCTATCTACCTAGAAAACACAGAGTACGAACCGGAACAGTTCCCAGGACTAGTATACAGACTGGAAGAACCGAAAGCAGCAGCATTACTATTCGGATCAGGAAAAGTCGTATGCACAGGAACACAGAGCCCTGAAATGGCGAAGGACGCAGTACACAAGATCATCGACGAGCTAAGAGAAGCGGACGTCGAGATCGGAGATAAGCCGGACATCACAGTACAGAACATGGTAGCCTCCTCAGAACTAGGAGAGACCCTCAACCTGAACAGGATTGCATTCGAACTGGTTGGAACAGAGTACGAACCGGAACAGTTCCCAGGACTAGTATACAGAATCGACGAACCAAATGTAGTATTCCTGCTATTCTCATCAGGAAGAATCGTCTGCACAGGAGGTAGAACCTACGACGATGTCAGAAGCGGCATCTCAAAACTTAAAGAGAACCTCGAAGAAATCGGGGCTCTCTGA
PROTEIN sequence
Length: 187
MSEDAFEDENIKIENVVASTTLDRRMPLDRIAIYLENTEYEPEQFPGLVYRLEEPKAAALLFGSGKVVCTGTQSPEMAKDAVHKIIDELREADVEIGDKPDITVQNMVASSELGETLNLNRIAFELVGTEYEPEQFPGLVYRIDEPNVVFLLFSSGRIVCTGGRTYDDVRSGISKLKENLEEIGAL*