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sw_10_scaffold_11245_3

Organism: SW_10_Nanohaloarchaea_43_6

partial RP 25 / 55 MC: 7 BSCG 13 / 51 MC: 1 ASCG 21 / 38 MC: 10
Location: 1085..1483

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=18313592 bin=Nanosalina tax=Nanosalina similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 127.0
  • Bit_score: 185
  • Evalue 2.80e-44
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 127.0
  • Bit_score: 185
  • Evalue 4.00e-44
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 114.0
  • Bit_score: 93
  • Evalue 5.40e-17

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 399
ATGAAAGAAGAAATGGATGAAGACTCTATAGTAGATGTAGATTTCTCCAGTATGGACTGGAATTACTATACAGACTCTTTCGGTATAGATGGCGCAATAAAGGAGCAAGTGGACGATTTTGTTGTCAAGGAACTGGCATCTCATGATACGGGAGAGGGAGATCATCTCTTGGTGAAACTGAGAAAGCAAAATATGACTACAATGGATGCAATCGACAAACTATCAAAGATGCTTCATATATCAAGGAACAGGATAGGTTACGCCGGTAACAAAGACAAGAGAGCGGTTACAGAGCAGTATATTTCCATTCAGGGCGTTGAGAAAGAAGAGGTAAGAAATGTATACACCGATGAATTTGATCTTGAAGTAGTAGGCAAAAACGGAAAAATCGGCCTAGGT
PROTEIN sequence
Length: 133
MKEEMDEDSIVDVDFSSMDWNYYTDSFGIDGAIKEQVDDFVVKELASHDTGEGDHLLVKLRKQNMTTMDAIDKLSKMLHISRNRIGYAGNKDKRAVTEQYISIQGVEKEEVRNVYTDEFDLEVVGKNGKIGLG