ggKbase home page

sw_10_scaffold_39_21

Organism: SW_10_Oscillatoriophycideae_48_33

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(23658..25325)

Top 3 Functional Annotations

Value Algorithm Source
Cyanobacterial porin n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XFB1_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 574.0
  • Bit_score: 640
  • Evalue 1.30e-180
cyanobacterial porin similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 574.0
  • Bit_score: 640
  • Evalue 3.80e-181
Cyanobacterial porin {ECO:0000313|EMBL:AFZ31173.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 74 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 574.0
  • Bit_score: 640
  • Evalue 1.90e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gloeocapsa sp. PCC 7428 → Gloeocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1668
ATGATTCCAGGTGCAGCTTTCAAAGAAGGCTCCGCTTGTGGGAGATTCTGGACGTTTTGTTTAGCCGGTAGCGCTTTGATGCAAGTTCTGCCTGTGCAGGTAGCGATCGCTACGCCGAATGCCCCTACTCTAGAAAAAACAGACGTGGCGCACTTCACCCGCGTTTTGCAACTCCGAGATGTTTCTCCCGGAGATTGGGCTTACGAGGCGCTGCAAAACCTCACTGAGCGCTACGGGTGTGTTAACCAAGAACGCGGCAACCAGACTTTAACCCGTTATGAATTTGCCGCAGAGTTAAGCGCCTGCCTGCAACAGTTAAAAAGCCGAATTACTCCTGAAACAGCCGATTTTGCCACCTTGAAGCGTTTGCAAAAACAATTTGTCCAAGAATTGGCAATTCTGCGGGGTGAAGTTGATGGGTTGCAGGCTCGCGTAACCGAACTAGAACTTACGCAGTTCTCTGCGACAACAAAACTTACTGGAAAGGTTTTTTTTAACCTTGCGGGAGCCTTTGCCAATGGCGAAGTGACAGCAGAAGTAGCTAACCCGATCCTCGCGCAGCAAACTGTTCGCCCAGGAGAAACTCGGCAGGTAGATGAGGCGAATACGACTTTTAGCAATTTAACGTGGCTGACGCTGAATACTTCTTTTACAGGTAGGGATCGCCTGGTTACTCAACTCGCAGTTGGGAATGGGTTTGCCTCGGCGGGGTTATTTAATACCTTGGGCGTTCCCTATAGTGATCGCACGGCTGGAGTAAGCGAAAATGAGGTGGTGCTGCGGGAGTTGTTCTATGCCTTTCCAGTGAGCGATCGCCTCCAAGCAGTGATTGGCTCTCGAATTAATTATTATCGTTATTTTGATAACAACCGTTTCACATCTTTTATTACTAGCACAAGTAGTGTTAACGCTAGTGGCAGTACCTTACTCAACACACTTGAGCGGGGAGCTGGCGCTATTTTACTTTGGGAGATTAGCGAACAATTGGAGCTGCGAGTCGGTTATCTGGGAGAAAACAGCGGATTTCTACCCAGTTCTCCCTTTAACTCCGCCTCTAACCCGACAGAAGGCTTATTTGGCGGTACGAATACTCTCACAAGTGAGGTAATCTTTTCCCCCACCGAGCGAGTGAAGCTGAGATTCCTTTACAATCGCTCCTATCTCCAAGCAACTGGGAGACAGGTGGATGGCACACTGGGAGAACCGATTTATGGATTTGCCGATGATAGAGTTGGGGTTAGCCTGGATGATGCCACAGCAGACACTTTCAGCTTTAATTTCGACTGGCTCGTTTCTTCTGGCTTAGGAGTGTTCGGGCGTTATGGCTATGGCACTACCCATCTCAATCCCCAAACACCTGGTTTATCGAATGGGGAAGTGAATGCCCAATCCTTACAACTGGGAGTGGCGTTTCCTGACTTAGGCAAGGAGGGGGCACAGGCAACTATATCCTATCTGATCCCTTTTTCCGTTCTCGATGGTCAGCAGTTTCTCATCTCTGGCGGTGGCGATGGGGGGGGTCAGTACGAGTGGAAACTTACCTATTATTACCCCCTCACAGACAACATTGCTCTGACTCCTGCTTTTTACCTAATTGGCAATCCCAACCACTTCAGCGACAATCCCAATGTTTATATTGGTAATTTACGCGCCCAGTTCAGTTTTTAG
PROTEIN sequence
Length: 556
MIPGAAFKEGSACGRFWTFCLAGSALMQVLPVQVAIATPNAPTLEKTDVAHFTRVLQLRDVSPGDWAYEALQNLTERYGCVNQERGNQTLTRYEFAAELSACLQQLKSRITPETADFATLKRLQKQFVQELAILRGEVDGLQARVTELELTQFSATTKLTGKVFFNLAGAFANGEVTAEVANPILAQQTVRPGETRQVDEANTTFSNLTWLTLNTSFTGRDRLVTQLAVGNGFASAGLFNTLGVPYSDRTAGVSENEVVLRELFYAFPVSDRLQAVIGSRINYYRYFDNNRFTSFITSTSSVNASGSTLLNTLERGAGAILLWEISEQLELRVGYLGENSGFLPSSPFNSASNPTEGLFGGTNTLTSEVIFSPTERVKLRFLYNRSYLQATGRQVDGTLGEPIYGFADDRVGVSLDDATADTFSFNFDWLVSSGLGVFGRYGYGTTHLNPQTPGLSNGEVNAQSLQLGVAFPDLGKEGAQATISYLIPFSVLDGQQFLISGGGDGGGQYEWKLTYYYPLTDNIALTPAFYLIGNPNHFSDNPNVYIGNLRAQFSF*