ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_10_scaffold_3838_1

Organism: SW_10_Bacteroidetes_40_5

partial RP 37 / 55 MC: 5 BSCG 36 / 51 MC: 5 ASCG 8 / 38
Location: comp(1..1740)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTR2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 591.0
  • Bit_score: 442
  • Evalue 7.30e-121
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 591.0
  • Bit_score: 442
  • Evalue 2.10e-121
Uncharacterized protein {ECO:0000313|EMBL:ACU03698.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 591.0
  • Bit_score: 442
  • Evalue 1.00e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1740
ATGAAACAGCTATTCATAACCATATTACTGGTTTTGGGAGGATTGACCAATGGATTAGTGGCCCAAAACGGCAAATTCGAAGCTTCTTTGAGTGAAAGCCAGGTGGGTATTGCTAAACGGTTTAAAGTTACTTTTTCATTAAAAGGGAAGGGCAGTAATTTTCAATCTCCTGCATTTAAGCATTTCGAAGTCCTCAGCGGGCCCAATAGATCTACCAGCATCCGCGTAATTAATGGAGATATGTCGCGCTCATTGAAGTATTCATTTATTTTGGTTGCACGAAAAAAAGGTGCGTTTGAAATAGCTCCTGCTAAGATTCAATCGGGTGGTGAAACCTTAACAACCCAACCCCTCGAGGTAAAAGTAGTAGGAAGTGATGAAGAAGCAAAAGACAACAATGGGGACGAAAAAGATAAAGGCGTGGTTGAGCGCATTAAGGATAAGTTATTCATTCGTACAATTGTTGATAAAACCAAACTTTACCAAGGAGAGCAGATCACTGCTACTTTTAAGCTGTATTCACGGGTTAATATTTCCAACTATTCGCTGGATGGCATGCCCCAATTCAATGGCTTTTGGACGCAGGACCTGAACAATCCAAAAAAGCTCCGGGTTAAGAACGAAAGGTACCAAGGCCAACGTTATAAAACTGCCATGCTACGACAAGTAGCATTGTTCCCTCAAAAATCCGGTACGCTTACCATTGATCCTATAGAAATGGAAATGGTGGTTCGGGTAAGGAAAAAAAGCAATAACAACAGGCATCCGTTCTTCAATAATTTAGGGAATTATGAAAACAAAAAGGTTAACATTACCAGTAATACCATTGATATTGATGTACAACCATTGCCTACCCAAGGACGCCCTGCCAGCTTCAAAGGTGCTGTTGGAAATTTTGACATGAACGTTAATCTGGACAACCGTCAAGTAAAAACCAACGAGTCCATAAATTTGGATGCAACAATCTCAGGGCAAGGCAATTTAAAGCTTATTGACCCCTTTAAAATCAACCTACCCGGTGATTTTGAAATTTATGATCCAAAAATCAACCAAAATATAAATTCGAGTGGCAATAAGATCAAAGGTTCTAAAAAATTTAAGTACGTGCTGATCCCCAGAAGTCCAGGGACGTTTAAATTAGACCCCTTAAAATTTTCCTACTTTCATCCGGATAAGGAAAAATACATTACTCATCGAACTAAAGAATTTACTTTTAATGTAAGAGAGGGCCAAGGCACGACAACACAGGCCAAGCCTGATAAGTCACAAGCCAAAAAAGAAGTTGAAATGCTGGAAGAGGATATCCGCTACATTAAGACCAATGCAGGTAATCTGCACCAAAAAGGCAATACATTCATTGGTTCAGGGCTCTTTTGGGGTTTATCCATCGCTCCTTTTTTATTGTTTAGCGGTATGCTTGTTTATCGTAGGCGCATCGAGGCATTACATCAAGACGAGGCCCTTTTCCGGAGTCGTAAAGCCCGAAAAGTTGCTAAAAAACGATTGAAAACGGCAGCCAAATATTTGAAAGGAGGTCAGCTGGATGCCTTTTATACGGAAGTTGAAAACGGTATATGGTACTATGCGGCAGATAAAACAGGACTCGAGGTGGCAGAATTAACCAAGGATCGGCTTAGGCAGGCAATGTTAGGCCAACAAATTCCTGAGCAGGAGGTTAATCGCTTGGTCGAGGTGTTGGATCAATGTGAGCAAGCAAGGTTTGCGCCTTCTTTAGCCACT
PROTEIN sequence
Length: 580
MKQLFITILLVLGGLTNGLVAQNGKFEASLSESQVGIAKRFKVTFSLKGKGSNFQSPAFKHFEVLSGPNRSTSIRVINGDMSRSLKYSFILVARKKGAFEIAPAKIQSGGETLTTQPLEVKVVGSDEEAKDNNGDEKDKGVVERIKDKLFIRTIVDKTKLYQGEQITATFKLYSRVNISNYSLDGMPQFNGFWTQDLNNPKKLRVKNERYQGQRYKTAMLRQVALFPQKSGTLTIDPIEMEMVVRVRKKSNNNRHPFFNNLGNYENKKVNITSNTIDIDVQPLPTQGRPASFKGAVGNFDMNVNLDNRQVKTNESINLDATISGQGNLKLIDPFKINLPGDFEIYDPKINQNINSSGNKIKGSKKFKYVLIPRSPGTFKLDPLKFSYFHPDKEKYITHRTKEFTFNVREGQGTTTQAKPDKSQAKKEVEMLEEDIRYIKTNAGNLHQKGNTFIGSGLFWGLSIAPFLLFSGMLVYRRRIEALHQDEALFRSRKARKVAKKRLKTAAKYLKGGQLDAFYTEVENGIWYYAADKTGLEVAELTKDRLRQAMLGQQIPEQEVNRLVEVLDQCEQARFAPSLAT