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sw_10_scaffold_9936_2

Organism: SW_10_Bacteroidetes_40_5

partial RP 37 / 55 MC: 5 BSCG 36 / 51 MC: 5 ASCG 8 / 38
Location: 1090..1608

Top 3 Functional Annotations

Value Algorithm Source
Sigma-24 n=1 Tax=Cecembia lonarensis LW9 RepID=K1M141_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 173.0
  • Bit_score: 232
  • Evalue 2.60e-58
Sigma-24 {ECO:0000313|EMBL:EKB50054.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 173.0
  • Bit_score: 232
  • Evalue 3.70e-58
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 173.0
  • Bit_score: 228
  • Evalue 1.80e-57

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Taxonomy

Cecembia lonarensis → Cecembia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 519
ATGAACAAGGATAGGGAAGAACTTCCAGAAAACGAAAAAAACGAAATATTCGAAAACGAATTTCTCCCTCACATCAATTCGTTGTACAATTTTGGATATTACCTCACCAGCGATGAGGACGATGCCAAAGACTTATTGCAAGAAACTTATTTACGTGCTTACAAATACATTAATTATTACCAAAAAGGCACCAATGCCAAAGCATGGTTGCTAAGGATACTTAAGAATACCTTTATCAATGACTATCGGAAGAAATCTAAAAAACCGGTACATTTAAGTTTTGAGGAATATTACACAGGTGATGAGACAGAAGAAACAGGTTTCATTGATTTACGGGAAGAAGTATTTGATAACCTGATAGGAGATGAGGTTTCCAGGTCCATTAACTCCTTGCCGGTTGATTACAGGTTGATCATATTACTTTGTGACATTGAAGGGTTTAAATACGAGGAAATTGCCCAAATTATTGACGTTCCCATTGGCACCGTTCGCTCAAGATTGCACAGAGCCAGGAACATG
PROTEIN sequence
Length: 173
MNKDREELPENEKNEIFENEFLPHINSLYNFGYYLTSDEDDAKDLLQETYLRAYKYINYYQKGTNAKAWLLRILKNTFINDYRKKSKKPVHLSFEEYYTGDETEETGFIDLREEVFDNLIGDEVSRSINSLPVDYRLIILLCDIEGFKYEEIAQIIDVPIGTVRSRLHRARNM