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sw_10_scaffold_2392_6

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(2154..2705)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DC53_HALXS similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 168.0
  • Bit_score: 225
  • Evalue 3.40e-56
transcription factor E similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 168.0
  • Bit_score: 225
  • Evalue 9.60e-57
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 168.0
  • Bit_score: 225
  • Evalue 4.80e-56

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Taxonomy

Halopiger xanaduensis → Halopiger → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGAACGACATAGACAACATAAAGGTGATGAATGGCTATCAGGAGCTCCTTGAAAACGAGGTAGTCCAGGCTTATCTCGCGGAAATAGTGGGATCGAAGGGTATGCCGGTTGCGATGGAACCCGTCGAAGACGAGATCACAGACGAGGACCTGGCCGAGGAGCTCGGGATAGATCCAAAAGTGGTACGCAGAACCCTGTTCATTCTGTACGAAAACGATTTAGCGAGCTACAGGAGAGAACGGGACGAGGAGTCGGGTTGGTATACATACCTCTGGCGTTTCGAATACGAAAACATACCGCAAAAACTCGACAAGGAACTCATAAAGCTCCGCGACAATCTAGAGGAACGCCTGACCTACGAGAAAGAGAAGGAGTTCTACATCTGCGAACTCGACGGAATCCGTTTCGAGTTCGCCGAATCAATGGAGCTATCATTCAAATGCCCCGAATGTGGCTCCCCACTCGAACCCATGGACAACGACGACATCATAGACGCGATGGAGGAGCGGCTAGAGAAACTCAACCACGAAGTCAAAAAGATAACTCAATGA
PROTEIN sequence
Length: 184
MNDIDNIKVMNGYQELLENEVVQAYLAEIVGSKGMPVAMEPVEDEITDEDLAEELGIDPKVVRRTLFILYENDLASYRRERDEESGWYTYLWRFEYENIPQKLDKELIKLRDNLEERLTYEKEKEFYICELDGIRFEFAESMELSFKCPECGSPLEPMDNDDIIDAMEERLEKLNHEVKKITQ*