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sw_10_scaffold_1917_2

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(921..1865)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 310.0
  • Bit_score: 335
  • Evalue 9.60e-89
Ribonuclease Z n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBA4_HALXS similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 310.0
  • Bit_score: 335
  • Evalue 6.80e-89
ribonuclease Z similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 310.0
  • Bit_score: 335
  • Evalue 1.90e-89

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Taxonomy

Halopiger xanaduensis → Halopiger → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 945
ATGTTGCGTGCGACTTTTTTAGGTACGGGTGGCTCGATCCCACAGACGGATAGGAACGCGAGCGCGGTGGCGGTCGAGATGGAGGGCGACCTACTTCTCTTCGACTGCGGCGAAGGAACTCAACGTCAGATGATGCGTTACGGATGTGGATTCGATGTCGATAAGATATTTGTAACTCATATACATGGCGACCACATACTTGGTCTGCCTGGACTGTCGCAGACCTGGACGTTTCAGGGGCGCGAAAAACCCGTTGAGGTCTATATGCCCGAAGGGACATACAGAGTCGTCAAGGACTGTTTCGATCTCGCCGACCACAACCCGCCCTACGAGGTCAAGTACCAGGAGGTCCGCCCCGGACATAGACTGAGTTTCGACGGATACGACGTAAAAATATTCGGGACGGATCACGGGGACTGCATCTCGGTGGGATACAGCCTAGAAGAACACGAAAGAAAAGGACGTTTTAACCGTGAGAAAGCGGAGGAGTTCGGCGTCGAACCCGGACCCAAGTTCTCGAAACTCCACGAAGGCGAATCCGTGGAGACGAGTGACGGCTCTGTCGTCGAACCCCAACAGGTTGTGGGGGAACCCCGGAAAGGAAGAAAAGTCGTCTACACCGGTGACACACAACCAACCCCCGAAACCGAGAAAGCGGCGCGGGAAGCCAACCTACTGATACACGACGGAATGTTCGGATCAACACACCGAGACAGAGCGACAGAGACGGGACACAGCACTACTTGCGGAGCCGCCGAGCTAGCGAAGGATTCAGGAGTCGAACTCCTTGTGTTGACACACATCAGCTCCAGATACAGTGACGGAGTCGAAGAACTCAGGAGAGAAGCCAAAAACGTATTCCCAGACACAGTAGTCGCCGAAGACGGAACAACCGTCGTAGTCGAATACCCCGAAAAAGACAGAGAAACCAGGATAGACAGCTAG
PROTEIN sequence
Length: 315
MLRATFLGTGGSIPQTDRNASAVAVEMEGDLLLFDCGEGTQRQMMRYGCGFDVDKIFVTHIHGDHILGLPGLSQTWTFQGREKPVEVYMPEGTYRVVKDCFDLADHNPPYEVKYQEVRPGHRLSFDGYDVKIFGTDHGDCISVGYSLEEHERKGRFNREKAEEFGVEPGPKFSKLHEGESVETSDGSVVEPQQVVGEPRKGRKVVYTGDTQPTPETEKAAREANLLIHDGMFGSTHRDRATETGHSTTCGAAELAKDSGVELLVLTHISSRYSDGVEELRREAKNVFPDTVVAEDGTTVVVEYPEKDRETRIDS*