ggKbase home page

sw_10_scaffold_947_15

Organism: SW_10_Halobacteriales_68_16

near complete RP 32 / 55 MC: 7 BSCG 28 / 51 MC: 3 ASCG 34 / 38 MC: 2
Location: 12547..13521

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LFA4_HALWC similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 314.0
  • Bit_score: 414
  • Evalue 1.20e-112
tfbA7; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 314.0
  • Bit_score: 414
  • Evalue 3.40e-113
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofe similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 314.0
  • Bit_score: 414
  • Evalue 1.70e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloquadratum walsbyi → Haloquadratum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 975
ATGACGGACGGCCGGTCAGTCGTGGAGACGAAAGAGCGGCCCAGTGAAGCGAGCGAGAGGGCCGTTCCGGAGCGGTGTCCGGAGTGTGACGGGCGTGTCGTCAGCGACGAGGGACAGGCGGAGTCCCGGTGTCGGGAGTGTGGGCTGGTCGTCTCCGAGGGGCAGGTCGACCGGGGGCCGGAGTGGCGGGCCTTCGATGCGGCCGAGCGCGACGAGAAATCGCGGGTCGGCACGCCGACGACGCCGCTGATGCACGACAGGGGGCTGTCGACGGCCATCGGCTGGCGCGACCAGGACGCCTACGGACAGTCGCTCGACCCCTCCCAGCGCTCGAAGATGGCACGGTTGCGGACCTGGGACGAGCGCTACCGGACGCGGGATGCCGGCGACCGGAACCTCAAGTTCGCGCTCGGGGAGATCAAGCGGATGGCCTCGGCGCTCGGCCTGGCCGACCCCGTCCGCGAGACGGCCTCGATCATCTACCGGCGCGCGCTCGACGCCGGCCTCCTGCCCGGCCGGTCCATCGAGGGCATCGCCTCCGCCACTCTGTACGCCGCCGCCCGCATCGAGGGGGTCGCCCGCTCTGTCGACGAGGTGGCCGCGGTCAGCCGCGTCGAGGCCCTCGAAATCGAACGCGCCTACCGGTACGTGGTCCGGGAACTCGACCTGACGATTCCGCCCACGAACCCCCTGGAGTACGTCGGTCGGTTCGCCTCGAAACTCGAGTGCCGGGACGACACCGAACGGCGCGCCCGGGAACTGATCGAGGAGGGTATCGAGGCGGGCGTCCACAGCGGCAAACACCCCGTCGGCATCGCCGCCAGCGCCCTCTACGCAGCGGGACAACTGACCGGCGAGGACATCGTCCAGCGGGAAGTCTCGGCGGTGACCGACGTCAGCACGGTGACCATCCGGAACCGCTACCGCGAACTGCTCGGGGTTGCCGAGGAGAATCGGCCCGAGAACGACGAGTAG
PROTEIN sequence
Length: 325
MTDGRSVVETKERPSEASERAVPERCPECDGRVVSDEGQAESRCRECGLVVSEGQVDRGPEWRAFDAAERDEKSRVGTPTTPLMHDRGLSTAIGWRDQDAYGQSLDPSQRSKMARLRTWDERYRTRDAGDRNLKFALGEIKRMASALGLADPVRETASIIYRRALDAGLLPGRSIEGIASATLYAAARIEGVARSVDEVAAVSRVEALEIERAYRYVVRELDLTIPPTNPLEYVGRFASKLECRDDTERRARELIEEGIEAGVHSGKHPVGIAASALYAAGQLTGEDIVQREVSAVTDVSTVTIRNRYRELLGVAEENRPENDE*