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sw_10_scaffold_6069_4

Organism: SW_10_Halobacteriales_66_29

near complete RP 34 / 55 MC: 5 BSCG 28 / 51 MC: 4 ASCG 33 / 38 MC: 4
Location: 3189..4049

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein AU-1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D442_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 260.0
  • Bit_score: 344
  • Evalue 1.30e-91
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 260.0
  • Bit_score: 344
  • Evalue 1.90e-91
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 259.0
  • Bit_score: 329
  • Evalue 9.70e-88

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 861
TTGCGGAGCCACGGCCGCCCTGGGCGGACCGCCGGCCGGTGCTCGACACGGCGGTCGAGATTCCGGCCGCGCTCGCGGCGCTCGTCCGCGGGGACGATCGAACGGCTGAGCGAGCGCGCCGCCGACCTCGACGCGGCGCTCGCCGACGCCGACCCACCGGCCGACGCCGCGCCGGCGGTCTACTGGCCCGGCGAGCGCAGCGTCTACTGCTGGTTCGGCCGGGACTCGCGGTTCGCGCTCGACGGGCGCCGCCGGGCCGCGACGACCACGATGGCCGGCCATCATCGGATCAAGGCCGCCGACGAGCGCGCCAGTTCCGGCGTCGACTTCGTGGAAGCCGTCTGTGACAGTCCCGACGAGGGCGAGTTCCCCTTCGACGCGGTCACCCGGCAGTTCGGGCCTGCCGAGGGCGACTCGGTCTCGATCGGCCACGGCAAGCCCGACGGCCGGTGTTACGACCTCGGCCCCGGAGAGGTGACCGGGCGGTCGACCAACGGTCAGGTGACCGTTCGCCGCGAACTCACCCCCGGCGGCACCTACGACGCGCTGGGCGGCGAGATCCAGCCCGGCGACGTTGCGATCACGAAGGTTAGGGAGGGGCGGTGGTGGTACCCGACGGTGTACCGCGGCGAGGACGGCGAGACCCGGGGGACGTACGTCAACGTCTGCACGCCCGTCGAGGTGTTTCCCCGGACGGTCCGGTACGTCGATCTCCACGTCGACGTGATCAAACAGCCGGACGGGACCGTCGAACGGGTCGACGCGGACGAACTCGCGGCCGCCGTGGACGCCGGCGATATCTCTCCAGCACTCGCGGAGAAAGCCCGCGACGTCGCGACGGCCGTCGAGAACGCGCTGTAA
PROTEIN sequence
Length: 287
LRSHGRPGRTAGRCSTRRSRFRPRSRRSSAGTIERLSERAADLDAALADADPPADAAPAVYWPGERSVYCWFGRDSRFALDGRRRAATTTMAGHHRIKAADERASSGVDFVEAVCDSPDEGEFPFDAVTRQFGPAEGDSVSIGHGKPDGRCYDLGPGEVTGRSTNGQVTVRRELTPGGTYDALGGEIQPGDVAITKVREGRWWYPTVYRGEDGETRGTYVNVCTPVEVFPRTVRYVDLHVDVIKQPDGTVERVDADELAAAVDAGDISPALAEKARDVATAVENAL*