ggKbase home page

sw_10_scaffold_124

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_124_31
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27862..28983
DNA (1122bp) protein (374aa)
Aminoglycoside phosphotransferase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WPW9_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ELY50393.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
aminoglycoside phosphotransferase
sw_10_scaffold_124_32
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29001..30035)
DNA (1035bp) protein (345aa)
Inner-membrane translocator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C8P1_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ELZ18983.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 1
amino acid/amide ABC transporter membrane protein 2, HAAT family
sw_10_scaffold_124_33
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(30035..30913)
DNA (879bp) protein (293aa)
Inner-membrane translocator id=2688265 bin=GWF2_Methylomirabilis_70_14 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter permease
sw_10_scaffold_124_34
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31047..31790
DNA (744bp) protein (248aa)
ABC transporter n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SW80_NATMM
ABC transporter
ABC transporter {ECO:0000313|EMBL:ELY29846.1}; ABC transporter related protein {ECO:0000313|EMBL:ADD05741.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; N
sw_10_scaffold_124_35
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31796..32488
DNA (693bp) protein (231aa)
ABC transporter n=1 Tax=Halomicrobium katesii RepID=UPI00036F57B7
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV48636.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_124_36
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32547..33899)
DNA (1353bp) protein (451aa)
Amino acid-binding protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IRQ5_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:ELZ98154.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-151
livK; amino acid-binding protein
sw_10_scaffold_124_37
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34235..35386)
DNA (1152bp) protein (384aa)
Acetyl-CoA C-acyltransferase 5 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZZ8_9EURY
Acetyl-CoA C-acyltransferase 5 {ECO:0000313|EMBL:EMA51186.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
acetyl-CoA acetyltransferase
sw_10_scaffold_124_38
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35922..36335
DNA (414bp) protein (138aa)
Transposase IS4 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZU5_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA51262.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
transposase IS4 family protein
sw_10_scaffold_124_39
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36619..36900
DNA (282bp) protein (94aa)
Transposase IS4 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZU5_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA51262.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
transposase family protein
sw_10_scaffold_124_40
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37034..37873)
DNA (840bp) protein (280aa)
Proline dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYL7_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:ELZ27738.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
proline dehydrogenase
sw_10_scaffold_124_41
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37992..39158)
DNA (1167bp) protein (389aa)
glycine/D-amino acid oxidase, deaminating (EC:1.4.3.19)
FAD dependent oxidoreductase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PH11_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EMA68879.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
sw_10_scaffold_124_42
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(39155..40768)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I216_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ90048.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
sw_10_scaffold_124_43
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

41190..42023
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5A4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52309.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_124_44

Not on your lists

42159..42383
DNA (225bp) protein (75aa)
Cold-shock DNA-binding domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MK81_9ARCH
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEN05503.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_124_45
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(42542..43090)
DNA (549bp) protein (183aa)
N-acetyltransferase GCN5 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XEB0_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELY59786.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DS
N-acetyltransferase GCN5
sw_10_scaffold_124_46
unknown

Not on your lists

comp(43436..43795)
DNA (360bp) protein (120aa)

This feature has no annotations

sw_10_scaffold_124_47
unknown

Not on your lists

comp(43799..44110)
DNA (312bp) protein (104aa)
conserved hypothetical protein (DUF433)
sw_10_scaffold_124_48
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(44329..46014)
DNA (1686bp) protein (562aa)
Glucose-methanol-choline family oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Z9_9EURY
Glucose-methanol-choline family oxidoreductase {ECO:0000313|EMBL:EMA53306.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
glucose-methanol-choline family oxidoreductase
sw_10_scaffold_124_49
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

46369..46665
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IDZ6_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB17058.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_10_scaffold_124_50
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

46809..47156
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9B6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54466.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_124_51
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

47312..48019
DNA (708bp) protein (236aa)
UPF0173 metal-dependent hydrolase C451_14410 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N452_9EURY
UPF0173 metal-dependent hydrolase C451_14410 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
hydrolase
sw_10_scaffold_124_52
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

48129..48596
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F004_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61287.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_10_scaffold_124_53
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(48707..48895)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR14_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10090.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_124_54
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(48992..49921)
DNA (930bp) protein (310aa)
isocitrate dehydrogenase (NAD(+)) (EC:1.1.1.41)
3-isopropylmalate dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3S9_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EMA52506.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
sw_10_scaffold_124_55
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(50562..51983)
DNA (1422bp) protein (474aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWV0_9EURY
sw_10_scaffold_124_56
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(51980..52315)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Y6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52509.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_124_57
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(52312..53262)
DNA (951bp) protein (317aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX10_9EURY
sw_10_scaffold_124_58
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(53255..53992)
DNA (738bp) protein (246aa)
Acetolactate synthase small subunit n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M989_HALMO
Acetolactate synthase small subunit {ECO:0000313|EMBL:EMA42357.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
acetolactate synthase, small subunit
sw_10_scaffold_124_59

Not on your lists

comp(53989..55974)
DNA (1986bp) protein (662aa)
acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Acetolactate synthase n=1 Tax=halophilic archaeon DL31 RepID=G2MKR2_9ARCH
sw_10_scaffold_124_60
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(56381..57424)
DNA (1044bp) protein (348aa)
leuA2; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase 2 {ECO:0000313|EMBL:AFK19280.2}; EC=2.3.3.13 {ECO:0000313|EMBL:AFK19280.2};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
2-isopropylmalate synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4X0_HALMT
Displaying items 31-60 of 63 in total

View Taxonomy