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sw_10_scaffold_419_18

Organism: SW_10_Halobacteriales_64_25

near complete RP 33 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 37 / 38
Location: comp(19113..20756)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein AU-1 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5H2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 526.0
  • Bit_score: 460
  • Evalue 1.90e-126
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 523.0
  • Bit_score: 460
  • Evalue 2.60e-126
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 527.0
  • Bit_score: 459
  • Evalue 1.50e-126

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Taxonomy

Haladaptatus paucihalophilus → Haladaptatus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1644
GTGCCCCGACCGACGACCGGGTTCCCCGCGATCGTGCCCCCGACGACTCCATTCCGACACCGCGAGGGAAGTCGAGTGACCGCTCGCGTCCGTCTTCGGGGGATCTACACCACCGCCCTTGCCCGGTTGCTGCGCGAGGACGGGTTCGAGGTCGTCCAACCCTCGCCGAGTATCGTCGAACGCTTCTCGATCGACGCCGAGACGAAGGCATACGACGCGACGATCACGAGTACCGACGACCGCCTCGGCGTGGGCATCCGCGGTGACCCCGAGACCGTAGGAACGCTTCGAAACCGCCTCTCGACCGCGGCGATCGACGCGTTCGCCTGGCGCGACGACGTTCCCCGCGAAGCGGTCTTCGATGCCGTCGTAACCGACACGCGGTCGGGCGGTGCCGTTCTCGATCTCGGTTCCCGGGAGGGCTACCTCCCCGCTCGCGCGGTCGACGGGGACGCCGAGGAGGGCGACCGACATCGCGTTCAGGTGCGCGAACCGAGCCCACCGTGGAGCGACGACCGACCCCTTCTCGATACCGAGCTCCGCATCAATGGCGGCGGCCTCGTGGCCCTCACGCGGACAGGCGACCCCGGCTCGGAATCGGGATCGACGGGCTCGTCGCATGCGGGGTCGCACGTCGGCGGGATCGGCGACGTAACCGACCTGCTCCCGACGGACGTCCCCGCGAACTGGCGTGCCCGGCCGACCGACGAGGGCGAAGAGGCCTCCTTCGACGCGCTCGATGCGGCGCTCGAAAACGCGGCGACCCGCGCGGATGCCATCGACGACGCGCTCGCGGCTGCCGGGGAGCCGGACGCCGAACCCACCGACACCGCCGACGCGGACGACGCCGCCGGCACTGCTGATACCGACGATACCGACGGCACTGATACCGATGTCGACGGTACCGATACCGACGGCGACGGCGGCCCCGCTTCGGTATGGGCCGGCCCCGAGACGGCCTGGGTACGGTTCGGGCGCGCCTCGCGGTTCGCGCTCGACGACCGCCGGCGGGCAGTGACCGCGACGATGGCCGGCCACCACCGGATCAAGGCCGGAAGCGAGGACGCGAGCGCCGCCGTCGACTTCGCCGAGAGCGTTTGTGGCTCCGCGGCCAACGGGACGGCGGCCAACGCAGGCGACGACCTCGATTTCCCGTTCGGCGTTACGACCCGGCAGTTCGGGCCGCACGAGGGCGAGGCGGTGGCGATCGCCCACGGCAAGCCCGACGGCCGCGGGGTTTCTCTCGGCCGCGGCGAAGTCGCGAGTATCGATCCGGACGGCGCGCTCCTCGTCCAACGGGAGATGCACTCGGATGGGGTCTACGACGCGATCGGGACCGAACGCCGCGCGGGCGACGTCGCGATCACCCGCTTCAAGGAAGGTCGGTGGTGGTATCGAACCCGGTACCGGGGCGCGGACGGCGACCGGCGGGGTACCTACGTCAACGTCTGTACGCCGGTCGAAGCGTTCCCTGATGCCGTTCGGTACGTCGACCTCTACGTCGACGTCGTCAGGCGGCCCGACGGCGAGGTCGAACGCGTCGACGACGACGAACTCGACGCGGCCGTCGCCGACGGGTTGGTGGGAACGGAACTCGCCCAGAGGGCCAGGTCGACCGCGACGGCTATCGAGCGGGCTCTTTGA
PROTEIN sequence
Length: 548
VPRPTTGFPAIVPPTTPFRHREGSRVTARVRLRGIYTTALARLLREDGFEVVQPSPSIVERFSIDAETKAYDATITSTDDRLGVGIRGDPETVGTLRNRLSTAAIDAFAWRDDVPREAVFDAVVTDTRSGGAVLDLGSREGYLPARAVDGDAEEGDRHRVQVREPSPPWSDDRPLLDTELRINGGGLVALTRTGDPGSESGSTGSSHAGSHVGGIGDVTDLLPTDVPANWRARPTDEGEEASFDALDAALENAATRADAIDDALAAAGEPDAEPTDTADADDAAGTADTDDTDGTDTDVDGTDTDGDGGPASVWAGPETAWVRFGRASRFALDDRRRAVTATMAGHHRIKAGSEDASAAVDFAESVCGSAANGTAANAGDDLDFPFGVTTRQFGPHEGEAVAIAHGKPDGRGVSLGRGEVASIDPDGALLVQREMHSDGVYDAIGTERRAGDVAITRFKEGRWWYRTRYRGADGDRRGTYVNVCTPVEAFPDAVRYVDLYVDVVRRPDGEVERVDDDELDAAVADGLVGTELAQRARSTATAIERAL*