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sw_10_scaffold_1100_9

Organism: SW_10_Halosimplex_carlsbadense_68_20

partial RP 15 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 15 / 38
Location: comp(4433..5392)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulatory protein rrnAC2519 n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Y2519_HALMA similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 318.0
  • Bit_score: 502
  • Evalue 4.30e-139
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 318.0
  • Bit_score: 502
  • Evalue 1.20e-139
Putative HTH-type transcriptional regulatory protein rrnAC2519 {ECO:0000255|HAMAP-Rule:MF_00584}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarc similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 318.0
  • Bit_score: 502
  • Evalue 6.00e-139

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Taxonomy

Haloarcula marismortui → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 960
ATGTCCCGGTCCGCACTGGTCGGCAACGTCACCGCAATGCTCGAGGACGCCGGGTTCGTCGTGAGCGACCGGTGTGCGATCCGACCGAAAAGCTTCGACGTTGCGGCGCGCCGGGGCAACGACGTGTTGCTGCTGAAGATTCTCGGAAACATCGACGCGTTCGATGCGAAGACGGGGGCAGAGATGCGCCGGCTCGGCGAGTACCTGCACGCGACGCCGCTGGTGATCGGCCTGCGGACGCGCGACGAGGAGCTCGACCCCGGCGTCGTCTACTTCCGGCACGGCGTGCCGGTGTTCTCGCCGGACACCGCGATGGACCTGTTCGTCGACGGCGTGCCGCCGCTCATCTACGCGGCGCCCGGCGGGCTGTACGTCAACATCGACAGCGAGGTGCTTGCGGACGCCCGCGAGGACCGCGACTGGTCGCTGGGCCAGCTCGCTCAGGAGCTGGGTGTCTCCCGGCGGACGGTCTCGAAGTACGAGGACGGCATGGACGCCAGCGTCGAGGTCGCCGCCCAGCTCGAGGAGATGTTCGACGAGGACCTGGGGTCGCCGGTGTCGGTCCTCGACGGCGCGGAGGCGGTTCGCGAGGCAGACGAACTCCCCGACGCTCCGGAGGCCGACCCGGACGACGAGCCGGTCGTGACGGTGCTCACCCGGGTCGGCTACGACGTCCACCTGACCGACCGCGCGCCGTTCAAGACCGTCAGCGAGGACGAGGACGAAGGGCAGATGCTCACCGGCCACTCGGCGTTCACGAAGACGGCAGAGAAACGCGCCCGGATCATGTCCTCCGTCGGGCAGGTGACCCGCACCCAGTCCGTGTACATCGTCGACACGGCCAAACGCGAATCCGTCGAGGGCACCGCGATCATCGAACAGGAGGAGATGGAGGACATCGAGGAGCAGGCCGACCTCCGGAACCTCATCTACGATCGGGTCGAAGAAGAGCCTGCCTGA
PROTEIN sequence
Length: 320
MSRSALVGNVTAMLEDAGFVVSDRCAIRPKSFDVAARRGNDVLLLKILGNIDAFDAKTGAEMRRLGEYLHATPLVIGLRTRDEELDPGVVYFRHGVPVFSPDTAMDLFVDGVPPLIYAAPGGLYVNIDSEVLADAREDRDWSLGQLAQELGVSRRTVSKYEDGMDASVEVAAQLEEMFDEDLGSPVSVLDGAEAVREADELPDAPEADPDDEPVVTVLTRVGYDVHLTDRAPFKTVSEDEDEGQMLTGHSAFTKTAEKRARIMSSVGQVTRTQSVYIVDTAKRESVEGTAIIEQEEMEDIEEQADLRNLIYDRVEEEPA*