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sw_10_scaffold_2172_2

Organism: SW_10_Halosimplex_carlsbadense_68_20

partial RP 15 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 15 / 38
Location: 2116..4554

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Rpb1 domain 5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTX7_HALUD similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 813.0
  • Bit_score: 1249
  • Evalue 0.0
RNA polymerase Rpb1 domain 5 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 813.0
  • Bit_score: 1249
  • Evalue 0.0
RNA polymerase Rpb1 domain 5 {ECO:0000313|EMBL:ACV10966.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 813.0
  • Bit_score: 1249
  • Evalue 0.0

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Taxonomy

Halorhabdus utahensis → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2439
ATGAGCGTTCCCGCCGACGAACGGGTCGTCGTTCGTCGGGACGGCGAAACCGACGTCACCGAAATCGGTTCGCTCGTCGACGGGCTCGCCGCCGTTCGCGAGACCCGCGAGGTCGACGGCCACGAAGTCGCGACCGCTCCGGACGACGTGGAAGTGCTGTCGCTTCGTTCGGACGAACGGGTCGAGTGGAAACCGCTCCGTGAGGTGAGCCGGCACGACGCACCGGACGAACTCCTGCGGTTCGAACTGGAGTCGGGACGGAACGTCCGAGCGACGAAGGCGCATTCGTTCGTCACGCGACGAAACAACGAGGTCGTCCCGGTCGCGGGCGACGACCTCACCGAGGGCGACTGGCTCCCGGTCGTCCGTTCGTTCGACGGGGAGGGTCCGAATACCGTCGACCTCCGGGAGTACCTCCCGGGCGAAGACTACTGGTTCACGTCGACACTGACCGACGGGGGAGCGACCGCCGACCAACCGGCTGGAGACGACCAGATCCGGAACAAACAGGACGCCCTCGAAGCGGGCGAACTGGACGAGCAGACGGTCTATCCGGTGCAGGGGACGACCGGACTCCCCGAACAGTTCCCGCTCGACGAGGAGACCGGATTCTTCCTCGGTGCGGTCCTCGCCGAGGGGAACGTCACGGACTATTACGTCTCGGTTTCGAACGTCGATGGCGTCTTCCAAGAGCACGTCCGTTCGTTTGCGGACCGGTTCGGTCTCTCGGTCGACGAGTACGACAACGAGAGCGGATTCGCGACGGGCCACGACATCCGCGTCAACGGCAAAGTCCTCGCGGACTTCGTCGAAGCGGCGTGTTACCGGGACGACGACAAGGTCGTGCCCGGCTTCGCGTTCGGCGCTCCACGGTCGTTCGTTCGCGGGATGCTCTCCGGATACTTCAGCGGCGACGGGAACGTCTCCGAGAACGCGGTTCGAGCGAGTTCGACGTCCCGCCGTCTCGCCGAAGGGGTAGCGCTCCTCCTCGGTCGCTTCGACGTGTCCGCGACGCTCGGCGATCGGGACGGGTCGACGACGCTCCGGGTCCCGACGAAATACGTTCCGGCGTTCGCTGACCGCGTCGGGATGATCGGCGGACGCGGAGACGAACTCGCCGACGCCGCTACGACAGTCGACGCCGAGAGCCCCGACGCGACCGACCAGATCCCGAACTTCGGTGACGCTCTCAGGACCGCGGCATCCGACGCGGGGATCCCGTCCCGCCAGGTCAACGCCGCACACGACCGGCAACGGGTCGGTCGGAACAGGCTGTCGGCCCTCGTGTCCGACATGGACGACGCGCTCGACGAACGCACGGAAGCGGTAGACGCGCTGGAGCGGGCCGTCGACGGCGACGTGGTCTGGGACCGTATCGAGTCCATCGAGACCGTCGAACCCGACGACGAGTACGTCTACGACTTCTCGGTATCGGGACTGGAGACGTTCACCACGGCACAGGGCGTCGTGACGCACAACACGATGAACACGTTCCACTACGCGGGCGTCGCGGAGATCGACGTCACGCAGGGGCTGCCGCGGCTCATCGAACTCGTCGACGCCCGGAAGGAGCCCGACACGCCGACGATGGAGGTCCACCTCGAGGACGAGTACGCGACCGACCGCGAGCGCGCCCACGAGGTGGTCTGGCAGATCGAGTCGACGAAGATCCTCCAGCTGGGCGACGTCTCGACGAACGTCGCCGACATGCTCGTGCAGGTCGACCTGAACGAGGAGACGCTCCGGGAGCGCTGGCCCACGGCCGACTCCGTCGAGGCCGTCGTCGAGGAGGTCGCCGAGACCGTCGAGTCGGAACTCGGCGTCGAGGTCGACATCCCCGCGCGGACCGTCATCCAGTTCGGCCCCGAAGAGCCCAGCTACCGCGAACTCCTCCAGCTCGTCGAGGAGCTGCGCGAGATAGTCTTCAAGGGCATCGAGGAGATAGGCCGGGTCGTCATCCGGAAGGAAGAGACCGACCAGGGCGAGGAGTTCGTTCTCTACACCGAGGGGTCGGACCTGGGCGAGGTCCTGGACCTGGAGGGCGTCGACGCCTCCCGCACGGACTGTAACAACATCCACGAGATCTACCGCAACCTCGGGGTGGAGGCGGCCCGCGAGGCCATCATCAACGAGACGATGCACACGCTCGAAGAGCAGGGCCTCGACGAGGTGAACATCCGCCATCTGATGCTCGTCGCCGACATCATGACCAACCGCGGGACCATCGAGTCCATCGGTCGCCACGGCATCTCGGGCAACAAGGAGTCGGTGCTCGCGCGGGCGGCCTTCGAGGTCACCGTCAACCACCTGCTCGACGCCGCCATCCACGGCGAGGTGGACGCGCTCAACGGCGTCACCGAGAACGTCATCGTCGGCAAGCCCATCAAACTCGGGACCGGCGACGTGGACCTGCGGATGAACGCCCGGGACGCCGACTGA
PROTEIN sequence
Length: 813
MSVPADERVVVRRDGETDVTEIGSLVDGLAAVRETREVDGHEVATAPDDVEVLSLRSDERVEWKPLREVSRHDAPDELLRFELESGRNVRATKAHSFVTRRNNEVVPVAGDDLTEGDWLPVVRSFDGEGPNTVDLREYLPGEDYWFTSTLTDGGATADQPAGDDQIRNKQDALEAGELDEQTVYPVQGTTGLPEQFPLDEETGFFLGAVLAEGNVTDYYVSVSNVDGVFQEHVRSFADRFGLSVDEYDNESGFATGHDIRVNGKVLADFVEAACYRDDDKVVPGFAFGAPRSFVRGMLSGYFSGDGNVSENAVRASSTSRRLAEGVALLLGRFDVSATLGDRDGSTTLRVPTKYVPAFADRVGMIGGRGDELADAATTVDAESPDATDQIPNFGDALRTAASDAGIPSRQVNAAHDRQRVGRNRLSALVSDMDDALDERTEAVDALERAVDGDVVWDRIESIETVEPDDEYVYDFSVSGLETFTTAQGVVTHNTMNTFHYAGVAEIDVTQGLPRLIELVDARKEPDTPTMEVHLEDEYATDRERAHEVVWQIESTKILQLGDVSTNVADMLVQVDLNEETLRERWPTADSVEAVVEEVAETVESELGVEVDIPARTVIQFGPEEPSYRELLQLVEELREIVFKGIEEIGRVVIRKEETDQGEEFVLYTEGSDLGEVLDLEGVDASRTDCNNIHEIYRNLGVEAAREAIINETMHTLEEQGLDEVNIRHLMLVADIMTNRGTIESIGRHGISGNKESVLARAAFEVTVNHLLDAAIHGEVDALNGVTENVIVGKPIKLGTGDVDLRMNARDAD*