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sw_10_scaffold_1189_5

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: comp(1821..2837)

Top 3 Functional Annotations

Value Algorithm Source
pdhB2; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1) similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 338.0
  • Bit_score: 549
  • Evalue 5.40e-154
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ85_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 338.0
  • Bit_score: 629
  • Evalue 1.40e-177
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:EMA50921.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 338.0
  • Bit_score: 628
  • Evalue 5.90e-177

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1017
GTGAGCTCGGCGACGGCCACGGAGGCGGAATCGGCGACCGAGCGCCTGACGCTGGTCGAGGGCGTTCGAGAGGGGCTCCACACCGAGATGGAGCGCGACGACCGCGTGATGGTGCTCGGCGAGGACGTCGGCAAGAACGGCGGGGTGTTCCGCGCGACCGAGGGGCTCTTCGAGGAGTTCGGCGAGGAGCGGGTCGTGGACACGCCGCTCGCCGAATCGGGAATCGTGGGCTCTTCGATCGGGCTCGCGCTCTCAGGAATGAAGCCGGTCGCGGAGATGCAGTTCATGGGGTTCATGTACCCCGCGTTCGACCAGCTCGTGAGTCACGCCGCGCGACTCCGGAGCCGGAGCCACGGCCAGTACACCTGTCCGATGGTGGTTCGCGCGCCGTACGGCGGCGGGATCCGCGCGCCGGAACACCACTCCGAGTCGAAGGAGGCCTTTTTCGTCCACGAACCGGGTCTCAAGGTGGTCGTGCCGAGCACGCCTGCCGACGCCAAGGGGCTGCTCACGGCGGCGATCCGGGACCCCGACCCCGTGGTGTTCCTCGAACCCAAACTCGTCTACCGCGCGTTCCGCGAGGAGGTTCCCCAGAACGCCTACGAGGTGTCCCTCGGCGAGGCCGCGATCCGCCGCGAGGGCTCGGACGTCTCGGTGTTCACGTGGGGGGCGATGACCCGCCCGACGCTGATCGCCGCCGACAACCTCGCCGACGAGCACGGCGTCGACTGCGAGGTGGTCGATCTTCGGACGCTTTCGCCGCTCGACGCCGGGACCGTGGTTGCGTCGTTCGAGAAGACCGGTCGTGCAGCCGTGGTCCACGAAGCGCCGAAGACCGCGGGTGTCGGCGCGGAGATCGCCGCGACGATCCAGGAGGAGGCACTGTGCTACCAGAAGGCACCGATCAGGCGGATCGCTGGCTTCGACGCCCCGATGCCGCTCCACGCGCTGGAGGACTACTATCTGCCACAGGCGGTGCGGATCCAGGATGCAATCCTCGAGACGGTCGCGTTCTGA
PROTEIN sequence
Length: 339
VSSATATEAESATERLTLVEGVREGLHTEMERDDRVMVLGEDVGKNGGVFRATEGLFEEFGEERVVDTPLAESGIVGSSIGLALSGMKPVAEMQFMGFMYPAFDQLVSHAARLRSRSHGQYTCPMVVRAPYGGGIRAPEHHSESKEAFFVHEPGLKVVVPSTPADAKGLLTAAIRDPDPVVFLEPKLVYRAFREEVPQNAYEVSLGEAAIRREGSDVSVFTWGAMTRPTLIAADNLADEHGVDCEVVDLRTLSPLDAGTVVASFEKTGRAAVVHEAPKTAGVGAEIAATIQEEALCYQKAPIRRIAGFDAPMPLHALEDYYLPQAVRIQDAILETVAF*