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sw_10_scaffold_1209_13

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: comp(12331..12900)

Top 3 Functional Annotations

Value Algorithm Source
TATA-box-binding protein n=2 Tax=Halococcus RepID=M0MH53_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 369
  • Evalue 2.60e-99
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 369
  • Evalue 3.60e-99
tbpE; transcription factor similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 337
  • Evalue 1.80e-90

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 570
ATGTCTGCCCAGGACCCGAAGGAGACGATCAACATCGAGAACGTAGTGGCGTCGACGGGCATCGGCCAGGAGCTCGATCTCCAGAGCGTGGCGATGGACCTCGAAGGGGCCGACTACGACCCCGAGCAGTTCCCCGGTCTCGTCTACCGGACCCAGAACCCCAAATCCGCCGCGCTGATCTTTCGATCCGGAAAGATCGTCTGCACCGGGGCGAAAAGCACCGCCGACGTCCACGAGAGCCTGGAGATCGTCTTCGACAAGCTCCGCGACCTCGAGATCCGCGTCGAGGACGACCCCGAGATCGTGGTCCAGAACATCGTCACCAGCGCCGATCTCCAGAAGACGCTGAATCTGAACGCGATCGCGATCGGTCTCGGTCTCGAAAACATCGAATACGAGCCCGAGCAGTTCCCCGGTCTCGTCTACCGGCTCGACGACCCCGAAGTGGTCGCGCTCCTCTTTGGCTCGGGCAAACTCGTTATCACGGGCGGCAAGGAACCGGCGGACGCCGAACACGCGGTCGACAAGATCACCGACCGGCTCGACGACCTCGGTCTGCTCGACGGCTGA
PROTEIN sequence
Length: 190
MSAQDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGAKSTADVHESLEIVFDKLRDLEIRVEDDPEIVVQNIVTSADLQKTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPADAEHAVDKITDRLDDLGLLDG*