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sw_10_scaffold_3039_8

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: 4995..5114

Top 3 Functional Annotations

Value Algorithm Source
Small nuclear ribonucleoprotein, lsm family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N278_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 40.0
  • Bit_score: 82
  • Evalue 1.00e-13
Small nuclear ribonucleoprotein, lsm family {ECO:0000313|EMBL:EMA50815.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 40.0
  • Bit_score: 82
  • Evalue 1.40e-13
small nuclear ribonucleoprotein similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 38.0
  • Bit_score: 63
  • Evalue 1.40e-08

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 120
ATGACCGACGGACGTCCTCTCGACGTGCTCGAAGCCACCCTCGGCGAGAGCGTGGCCGTGCGGCTGAAAGACGGCGAGATCTACACGGGGTCACTCGCTGGCTACGACCAGCACATGAAC
PROTEIN sequence
Length: 40
MTDGRPLDVLEATLGESVAVRLKDGEIYTGSLAGYDQHMN