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sw_10_scaffold_3329_5

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: 2281..2832

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 183.0
  • Bit_score: 309
  • Evalue 3.30e-81
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 183.0
  • Bit_score: 309
  • Evalue 2.30e-81
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 182.0
  • Bit_score: 245
  • Evalue 9.00e-63

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGACTGTTCGTGAGCGTCGATCTCGACGGGCTCGCCGGGGAGATCGCCGATGTCCAGGAAGCGATCGCCGACGCGAGCGGGGTCCGACGCACCGATCCCGGGAACGTCCACGTGACGCTGAAATTTCTCGGGGAAGTCGAAGACGAGCGAGTTCCGGACCTCGCGGCGGAACTGGCTGAGGCGATCGACGGGGCAGGTGTCGATTCGTTCACTGCTACGTTCGGCGGGCTCGGCGCGTTCCCGAGCGAGGAGTACATCCGGGTACTCTGGATCGGCGTCCGGGAGGGTGGTGACGAGCTTGCCAGACTCCACGAAGCGATCGAAAACCGAACTACCGGAATGGGGTTCAATCCCGCCAATCACGAGTTCACGCCGCACGCCACGGTCGCCCGGATGGATCACGCCGGCGGCAAGGAGCGGGTCCAGCACGCGCTCCGCGAGACCGATCCCACTGTCGGCACGCTCGATGTCGGTGAAGTCCGGCTGACTGAGAGCGTGCTCGACGATGACGGACCGGAGTACACGACCGTCGAGCGAATTGAGTTGTGA
PROTEIN sequence
Length: 184
MRLFVSVDLDGLAGEIADVQEAIADASGVRRTDPGNVHVTLKFLGEVEDERVPDLAAELAEAIDGAGVDSFTATFGGLGAFPSEEYIRVLWIGVREGGDELARLHEAIENRTTGMGFNPANHEFTPHATVARMDHAGGKERVQHALRETDPTVGTLDVGEVRLTESVLDDDGPEYTTVERIEL*