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sw_10_scaffold_2536_6

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: 3007..3714

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 236.0
  • Bit_score: 436
  • Evalue 1.80e-119
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 236.0
  • Bit_score: 438
  • Evalue 4.30e-120
DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 237.0
  • Bit_score: 357
  • Evalue 3.60e-96

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 708
GTGAGCGCCGCGTACGACGTCGCGTTCATCGACCGCGGCGACCGCGACGCTCGCTTCCTCGTCAGAGGGATCACGCCGGCGTTCGCCAACGGCATCCGGCGGGCGATGGTGGCCGACGTTCCCACCCTGTCGATCGACACCGTGCGCGTGGTCGAGAACTCGTCGGTGATGTTCGACGAGCAGATCGGCCACCGGCTCGGGATGGTGCCCCTTTCCGCGCCGCCGAACGAGTTCGAATCGGGCGAGGGCGTCACGCTGGCCCTCGACGTTTCGGGCCCCGACACCGCGTACTCGGGCGACCTCGTCAGCAGCGATGCGGTGGTCGAACCCGCCGAGGACAACGTCCCGATCATCGAGCTCAAGGAGGGCCAGCGCCTCGAAGTCGAGGCCGAGACCGTGCTCGATACCGGCAAGTCCCACGCCAAACACCAGGGCGGCGTGGCGGTCGGCTACCGCCATCTTCAGAGAGTGGAGGTCGTCGGCGACCGCGAGGAGTTCGCCGACGAGGAGCCGAACATTCTGCGAGGCGTGATCGAAGAGGACGGCGAGCTGATCCCGACCGAGGAGTTCGATCACGACCTCACGAACCGGTATCCCGACAAGGAGGTCGCGGTCGAGGACGTGCCGAACGCGTTCGTCTTCCACGTCGAGACCGACGGCTCGCTGACCGTCGAGGAGCTGGTGACGGCGGCGGTCGACTCGCTGGAA
PROTEIN sequence
Length: 236
VSAAYDVAFIDRGDRDARFLVRGITPAFANGIRRAMVADVPTLSIDTVRVVENSSVMFDEQIGHRLGMVPLSAPPNEFESGEGVTLALDVSGPDTAYSGDLVSSDAVVEPAEDNVPIIELKEGQRLEVEAETVLDTGKSHAKHQGGVAVGYRHLQRVEVVGDREEFADEEPNILRGVIEEDGELIPTEEFDHDLTNRYPDKEVAVEDVPNAFVFHVETDGSLTVEELVTAAVDSLE