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sw_10_scaffold_4639_2

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: 164..1633

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 489.0
  • Bit_score: 931
  • Evalue 4.70e-268
tRNA-splicing ligase RtcB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 489.0
  • Bit_score: 931
  • Evalue 3.40e-268
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 490.0
  • Bit_score: 810
  • Evalue 2.40e-232

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1470
ATGGACACCTACGACGCCGACGGGATCACGCTCGAACGCGTAGCGGAGAACGTCTGGGAAATCCCACAGGAAGGCGGGATGAACGCGCCCGCACGGGTGCTTGCGAGCGAAGCGCTGCTCAACGAGATCGCGGACGACATGACGCTCGAACAGCTCAAGAACTCGACGAATCTCCCCGGTGTGGAGAAGTACGCGATCTGCATGCCCGACGGCCACCAGGGCTATGGATTTCCTGTGGGTGGGGTCGCCGGCATCGACGCCGAGGACGGCTGTATCTCGCCCGGAGCGGTGGGCTTCGACATCAACTGTGGCGTCCGGATGATGACGACGAACCTCGCCTACGAAGACGTTGAGGGTCACGAGGAGGAACTGGTCGAGTCGCTGTTCGCGAACATCCCGTCCGGGCTCGGCGGCGGTGGCGTGGTCGAATCGGGCATCGACACCGTCGAAGCCGTCCTCGAACGGGGGATGAACTGGGCGCTGGAGGAGGGCTACGCCGTCGCCGAGGACCTCGCCCACTGCGAGGACGAGGGCCGCCGGCCGGACGCCGATCCAGGCGTTGTCTCACAGAAGGCGAAGGACCGCGGGAAGAATCAGATCGGAAGCCTCGGCTCGGGCAACCACTTCCTCGAAGTCCAGCGCGTGACCGACGTCTTCCGGGCGGACGTGGCGGATGCGTACGGTCTCGCCGAGGAGCAGATCGTGGTGTTGATCCACTGCGGGAGCCGGGGGCTGGGCCACCAGGTCTGCACCGAGTACACCCGCGAGGTCGAGCAGGCCCATCCTGGGCTGCTCGATCGACTCCCGGACAAGGAGCTCGCGGCCGCGCCCGCCGGGAGCCAACTCGCCGAGGAGTACTACGGCGCGATGTGTGCGGCGATCAACTACGCGTGGGTCAACCGCCAGCTCATCATGCACCGCACTCGTCAGGTGTTCGAGCGCGTCTTCGATCGGTCGTGGGAGGCAATGGAGATGGACCTGCTGTACGACGTCGCGCACAACATCGCGAAGAAGGAGGTCCACGACGTCGGGGGCGAGGACGGCGAGGAAGAACGCGAACTCTACGTCCATCGGAAGGGCGCGACGCGGGCGTTCCCCGCCGGCCGAGAGGAGGTTCCGAGTGCGTACCGCGACGTAGGCCAGCCCGTCATCATTCCGGGAAGCATGGGCGCAGGGAGCTACGTGCTTCGTGGCGGCGAGGCCTCGCTCGAAACCACGTTCGGCTCGACCGCCCACGGCGCGGGCCGGACGATGAGTCGGACCCAGGCCAAGAACGAGTTCTGGGGTGAGGACGTCCAGGACGACCTGCAGGAGCAGAAGGTGTACGTGAAGGCCCAGAGCGGCGCGACAGTGGCCGAGGAGGCGCCAGGCGTCTACAAGAACGTCGACGAGGTGGTGCGGGTCTCCGAGGAACTCGGGATCGGCGATACGGTCGCGCGGACGTTCCCGGTCTGCAACATCAAGGGGTGA
PROTEIN sequence
Length: 490
MDTYDADGITLERVAENVWEIPQEGGMNAPARVLASEALLNEIADDMTLEQLKNSTNLPGVEKYAICMPDGHQGYGFPVGGVAGIDAEDGCISPGAVGFDINCGVRMMTTNLAYEDVEGHEEELVESLFANIPSGLGGGGVVESGIDTVEAVLERGMNWALEEGYAVAEDLAHCEDEGRRPDADPGVVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFRADVADAYGLAEEQIVVLIHCGSRGLGHQVCTEYTREVEQAHPGLLDRLPDKELAAAPAGSQLAEEYYGAMCAAINYAWVNRQLIMHRTRQVFERVFDRSWEAMEMDLLYDVAHNIAKKEVHDVGGEDGEEERELYVHRKGATRAFPAGREEVPSAYRDVGQPVIIPGSMGAGSYVLRGGEASLETTFGSTAHGAGRTMSRTQAKNEFWGEDVQDDLQEQKVYVKAQSGATVAEEAPGVYKNVDEVVRVSEELGIGDTVARTFPVCNIKG*