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sw_10_scaffold_5215_2

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: comp(181..723)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 332
  • Evalue 4.70e-88
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 167.0
  • Bit_score: 299
  • Evalue 5.20e-79
DNA-directed RNA polymerase subunit A'' n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFA5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 181.0
  • Bit_score: 331
  • Evalue 7.40e-88

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 543
GTGTTCAAGGGGATCGACGAGGTCTCGCGGGTCGTCATCCGAAAGGAGGAGACCGACCGGGGCGAGGAGTTCGTGCTCTATACCGAAGGGTCGGCCTTCGGCGACGTGCTCGACATCGAGGGCGTCGACGCTTCCCGCAGCACCTGTAACAACATCCACGAGATCCACCGCAACCTCGGGGTCGAGGCCGCGCGCGAGACCATCATCGAGGAGACGATGAACACACTCGAAGAGCAGGGTCTCGGCGACGTGAACATCCGCCACCTCATGCTGGTCGCGGACATCATGACTGCCGAGGGCACGATCGAGTCGATCGGCCGCCACGGCATCTCGGGATCGAAGGACTCCGTTCTCGCCCGCGCCGCGTTCGAGGTCACCGTCAATCACCTGCTCGATGCGGCGGTCCACGGCGAGATCGATGACCTCAACGGTGTGACCGAGAACGTCATCGTCGGCAAGCCGATCAAGCTCGGCACCGGCGACGTCAACCTCCAGATGGGCGGTGCGACCGGCGGCAGCGCGGACGACAGTCGCGCCGGTTGA
PROTEIN sequence
Length: 181
VFKGIDEVSRVVIRKEETDRGEEFVLYTEGSAFGDVLDIEGVDASRSTCNNIHEIHRNLGVEAARETIIEETMNTLEEQGLGDVNIRHLMLVADIMTAEGTIESIGRHGISGSKDSVLARAAFEVTVNHLLDAAVHGEIDDLNGVTENVIVGKPIKLGTGDVNLQMGGATGGSADDSRAG*