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sw_10_scaffold_5215_4

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: comp(1601..3979)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 768.0
  • Bit_score: 1426
  • Evalue 0.0
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 768.0
  • Bit_score: 1426
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 769.0
  • Bit_score: 1229
  • Evalue 0.0

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2379
GAGTGCAAGACCTGCGGTCAGCACTCGGGATCCTGCAATGGCCACTTCGGCCACATCGAACTCGCCGCGCCCGTGATTCACGTCGGGTTCACGAAGCTGATGCGACGACTGCTCCGTGGCACCTGCCGGGAGTGTTCGCGGCTGCTACTCGACGAAGCCGAGCGCAACGAGTTCGCCGAGCGTCTCCAGCGAGCGCGCGAACTCGACAACGACGTTAATGACGTGACGAAGGCGGCGATCCGCCAGGCCAGAAAGAAGGATCGGTGTACGTACTGCGGCGAGGAGCAGTACGACATCCAACACGAGAAGCCGACGACGTACTACGAGGTCCAAGACGTGCTCGCGGCGGAGTACGCCGAGCTGATCGCCGAAGCGATGCAGCCCGACGAGGAATCGGGCGATCCCGGGAGCTCGCCCCAGCAGCTCGCCGAGGAGACCGACATCGATCTCTCGCGGATCAACGACATTCTGGGTGGGGAGTTCCGGCCGCGCGAGGCCGACCGCGAGGCGATCGAGCGCGCGCTCGACGTCGACCTCACCGAGGAGGACATGAACAAGCTGATGCCGAGCGATGTCCGGGACTGGTTCGAGGCGATCCCGGACGAGGACGTCGAAGTGCTCGGGATCGACCCCGAGCGCTCGCGGCCGGAGTGGATGGTCCTCACCGTGCTTCCGGTGCCGCCCGTCACCGCCCGGCCGTCGATCACCCTCGACAACGGCCAGCGAAGCGAGGACGACCTGACCCACAAACTCGTGGACATCATCCGGATCAACCAGCGGTTCATGGAGAACCGCGAGGCCGGCGCGCCCCAGCTCATCATCGAGGACCTCTGGGAGCTGCTCCAGTACCACGTCACGACGTTCATGGACAACGAGATCTCCGGCACGCCGCCCGCGCGACACCGCTCGGGCCGCCCCCTCAAGACCCTCTCCCAGCGGCTGAAGGGCAAGGACGGTCGGTTCCGGGGCAGCCTCTCGGGCAAGCGCGTGAACTTCTCGGCCCGTACTGTTATCTCGCCGGACCCGACCCTCAGCCTCAACGAGGTCGGCGTTCCCGAACGGGTCGCGGAGGAGATGACCCAGACGATGAACGTCAACGAGCGCAACATCGAGGAAGCGCGCCAGTACGTTCGCAACGGCGCGGAGACCCATCCCGGCGCGAACCGGGTCATCCGCCCCGACGGCAAGGTGATGAAGATCCTCGACCAGGCAAAAGAGGAGCTCGCCGAGCGGATCGAGCCCGGCTGGCAGGTCCAGCGCCACCTTTCGGACGGCGACATCGTGATCTTCAACCGCCAGCCGTCGCTCCACCGAATGAGTATCATGGCCCACGAGGTCGTGGTGATGCCGTACAAGACCTTCCGGCTGAACACGACCGTCTGTCCGCCCTATAATGCTGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCGCGTGCGGAGGCCCGCGTGCTGATGCGTGTCCAAGAGCAGATCCTCTCGCCCCGCTTCGGCGGGAACATCATCGGCGCGATCCAGGACCACGTCTCGGGAACCTATCTCCTCACCCACGACGATCCCGAGACCGGCGGGGTGCCCCGCTTCAACGAGACCCAGGCCCTCGATCTGCTCCGGGCGACCGCGGTCGACGGGCTGCCCGACCCCGACGGCGAGACGGAGACCGGTCCGTACTGGACGGGCCGGACGATCTTCTCCGAACTCCTGCCGGACGGACTCGATCTCGAGTTCACCTCGTCGGCCGGCGACACGGTCGTGATCGAGGACGGCCAGCTCCTCGAGGGGACCGTCGACGAGGACGCGGTCGGGGCGTTCGGCGGCGAGGTCGTCGATACCGTCGTGAAAAAGCATGGCGAGACCCGCGCCCGCGTGCTCATCAACGAGGTCGCGTCGCTGGCGATGCGTTCGATCATGCACTTCGGGTTCTCGATCGGGATCGACGACGAGTCGATCTCCGCCGACGCCGAGACCCGGATCGACGAGAGCATTGCGAATGCCTACGAGCGGATCGACGAGCTCATCACGACCTACGAGAACGACGAGCTCGAATCGCTGCCAGGGCGAACGGTCGACGAGACCCTCGAGATGAAGATCATGCAGACGCTCGGGAAAGCGCGGGACTCGGCGGGCGACATCGCGGAGGACCACTTCACGGAGGACAATCCCGCGGTGGTCATGGCCGAATCCGGCGCGCGTGGCTCGATGCTCAACCCGACCTCTCGGCGGACGCTCACGGGTTCGTCGAGCACTCCTACCGGAGCGGGCTCGGGCCGCGGGAGTTCTTCTTCCACGCGATGGGTGGCCGCGAGGGGCTCGTGGACACGGCGGTCCGGACCTCGAAATCGGGCTACCTCCAGCGCCGGCTGA
PROTEIN sequence
Length: 793
ECKTCGQHSGSCNGHFGHIELAAPVIHVGFTKLMRRLLRGTCRECSRLLLDEAERNEFAERLQRARELDNDVNDVTKAAIRQARKKDRCTYCGEEQYDIQHEKPTTYYEVQDVLAAEYAELIAEAMQPDEESGDPGSSPQQLAEETDIDLSRINDILGGEFRPREADREAIERALDVDLTEEDMNKLMPSDVRDWFEAIPDEDVEVLGIDPERSRPEWMVLTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKDGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVAEEMTQTMNVNERNIEEARQYVRNGAETHPGANRVIRPDGKVMKILDQAKEELAERIEPGWQVQRHLSDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQILSPRFGGNIIGAIQDHVSGTYLLTHDDPETGGVPRFNETQALDLLRATAVDGLPDPDGETETGPYWTGRTIFSELLPDGLDLEFTSSAGDTVVIEDGQLLEGTVDEDAVGAFGGEVVDTVVKKHGETRARVLINEVASLAMRSIMHFGFSIGIDDESISADAETRIDESIANAYERIDELITTYENDELESLPGRTVDETLEMKIMQTLGKARDSAGDIAEDHFTEDNPAVVMAESGARGSMLNPTSRRTLTGSSSTPTGAGSGRGSSSSTRWVAARGSWTRRSGPRNRATSSAG*