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sw_10_scaffold_5231_4

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: 2090..2323

Top 3 Functional Annotations

Value Algorithm Source
NMD3 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAN4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 77.0
  • Bit_score: 155
  • Evalue 3.10e-35
NMD3 family protein {ECO:0000313|EMBL:EMA42811.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 77.0
  • Bit_score: 155
  • Evalue 4.40e-35
NMD protein affecting ribosome stability and mRNA decay similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 87.0
  • Bit_score: 113
  • Evalue 2.90e-23

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 234
ATGAGCGAGTCGCGGCAGTTCTGTCCGCGGTGTGGCGATCCCGTCGAGTCGGCGGTCGCCGCGACCGATGGACGCGCCCCCATCTGCGAGGACTGCTATTTCGAGAACTTCGACCTCGTCGACACGCCCGATCGAATCGAAGTCCTGGTGTGTGCGACCTGCGGGGCGATCCAGCGCGGGAAGCGCTGGGTCGACGTCGACGCGCGCGATTACACCGACGTTGCGATCGACTAG
PROTEIN sequence
Length: 78
MSESRQFCPRCGDPVESAVAATDGRAPICEDCYFENFDLVDTPDRIEVLVCATCGAIQRGKRWVDVDARDYTDVAID*