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sw_10_scaffold_4486_6

Organism: SW_10_Natronomonas_70_41

partial RP 12 / 55 BSCG 8 / 51 ASCG 8 / 38 MC: 1
Location: 3148..3867

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 240.0
  • Bit_score: 375
  • Evalue 9.90e-102
DNA-directed RNA polymerase subunit D {ECO:0000255|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00320};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 240.0
  • Bit_score: 375
  • Evalue 4.90e-101
DNA-directed RNA polymerase subunit D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPOD_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 240.0
  • Bit_score: 375
  • Evalue 3.50e-101

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 720
ATGGCCGAGGAATACGACGTAACGTTCATCGACCGCGGCGACCGGACCGTCCGCTTTCTCGTCCGCGGCGTGACGCCGGCGTTCGCCAACGGCGTCCGTCGGGCGATCCTCGCCGACGTCCCGACGCTGTCGATCGACTCGGTCCGCGTGATCGAGAACTCCTCGGTCATGTTCGACGAGCAGATCGCGCTCCGTCTCGGCCTCGTCCCGCTCTCGACGCCGGACGACTACCGGCCGGACGAGGCGGTCACGCTGGCCATCGACGTCGAGGGCCCGGCGACGGCGTACTCCGGCGACCTCGTCTCCACCGACGACCAGGTCCAGCCGGCCGACGAGAACGTGCCGATCATCGACCTCAAGGAGGGCCAGCGGCTGGAACTGGAGGCCGACGCCCGGCTGGGCGTGGGCAAGGACCACGCCAAGCACCAGGGCGGCGTCGCGGTCGGCTACCGGCACCTCCAGCGCGTGGAGGTCCTGGGCGAGACGGGCGAGTTCGAGGACGACGAAGCCCGGATCCTCCGCGGCGTCATCGAGGAGGGCGCCGCCGACCACGCCGCCGAGGACGTCGAGGACGGGGACCTCGTCCCCGCCGACGCGTTCGACAACGACCTCAGCCAGCGGTACCCCGGCAAGGAGGTCGACGTCGAGGACGTCCCGAACGCCTTCGTGTTCAGCGTCGAGAGCGACGGCTCGGTGCCCGTCGAGGACCTCGTCGTCGAG
PROTEIN sequence
Length: 240
MAEEYDVTFIDRGDRTVRFLVRGVTPAFANGVRRAILADVPTLSIDSVRVIENSSVMFDEQIALRLGLVPLSTPDDYRPDEAVTLAIDVEGPATAYSGDLVSTDDQVQPADENVPIIDLKEGQRLELEADARLGVGKDHAKHQGGVAVGYRHLQRVEVLGETGEFEDDEARILRGVIEEGAADHAAEDVEDGDLVPADAFDNDLSQRYPGKEVDVEDVPNAFVFSVESDGSVPVEDLVVE