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sw_10_scaffold_4619_3

Organism: SW_10_Halobacteriales_68_92

partial RP 17 / 55 MC: 1 BSCG 14 / 51 MC: 1 ASCG 17 / 38 MC: 2
Location: comp(583..3108)

Top 3 Functional Annotations

Value Algorithm Source
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 825.0
  • Bit_score: 1298
  • Evalue 0.0
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 825.0
  • Bit_score: 1298
  • Evalue 0.0
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 825.0
  • Bit_score: 1298
  • Evalue 0.0

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2526
GTCGAACTCGACCACGTCGAGGACATCGTCCGGGCCGTCGAGTCGGAGTACCTCGAGACCCGCGTGGACCCGCTGGACCCCGTCGGCACCGTCTCCGCACAGTCCATCGGCGAACCCGGCACGCAGATGTCGCTGCCGGCCAGTGAGCGGGTCGTCGTACGACGAAACGGCGAGACCGACGTGACCGAGATCGGCCAGTTCGTCGATTCGCTGATGGACGGCCGAGAAACGCGCGAGTTCGACGGCCACGAGGTCGCACTCGCACCCGACGGAATAGAGATACCGAGCCTGTCGGCGGACGAGACCATCGAGTGGAAGCCACTCGAGGAGGTCAGCCGACACGAGACGCCCGACGAACTGCTCGAGTTCGAACTTGAATCCGGGCGGACGATCCGGGCGACGAAGGCCCACTCGTTCGTAACTCGTCGCGACAACGGAATCGTTCCCGTCGCTGGCGAGGCCCTGGAGCCGGGGGACTGGCTCCCCGTCGTCGCCTCCCTCGACGTAGAGGCGACGGGGACCGACGCGGTCGACCTCCGCGAGTACCTGCCGCCGAGCGATTACTGGTACACGTCTACGCTTGCCGACGGTGGCGTCGAGTCGGTCCCGGCCGGTGCGGATCAGCTTCGTGACAAGCGGTCGGCACTGGAGTCGGGCGATCTCGACGAACACACTGTGTATCCGGTCGGTGGGACGGTCGGGCTGCCGGAGCAGTTCCCGCTCAATGACGTGACTGGGTTCTTCATCGGTGCGTGGCTCGCCGAAGGGTCGTCGACCGACCACTACGTCTCCGTCTCGAACGTTGATCCCGACTTCCAACACCGGGTTCGCGCGTTCGCCGAACGGTTCGACCTCTCGGTGAACGAGTACGAGAACGACAGCGGCTTCGCGACCGGATACGACATCCGCGTGAACGGGACGGTCCTCGCGGACTTCCTGCAGGCTGCCTGCGTCGAAGACGGGGAAAAAGTCGTTCCCGGATTCGCCTTCGGCGCAACAGACCGGTTCGCCGCCGCTCTCCTCCGTGGCTACCTCAGCGGTGACGGCAACGTTGGGACGAACGCGGTTCGTGCAAGTTCGATTAGCGACCGGCTCATCGCCGGGGTTTCGCTGCTCCTTGCACGATTCAACGTGTACTCGACGCTGGGCGAGCAGGATGGCTCTCGGACGCTCCGAGTCCCGAAGAAGCACGTTCCGCGGTTTACCGACCGGGTCGGACTGGTCGGTGAGCGTGGACACGAACTCGAGTCCCTCGCCGCTGAAACGGACCCGAACGGCCCGGATGCGACTGATCAGGTTCCGAACTTCGGTGACGCACTCGAGGTGCTCGCCGACGCCGCAGGAATCCCAAATCGACAGGTCAACGCCGCGACGAACCGCCAGCGCATCGGCCGGAACCGACTCGCCCGGCTCGTTGCCGAAGCCGAAGCGGAACTCGACGGGTCGATACCCGAACTCGACGCGCTGCGAAAGGCTATCGCTGGCGACGTCGTCTGGGACCGTATCGAATCAATCGAGACAGTCGAAAGCGACCACGAGCACGTGTACGACTTCTCGGTCGAAGGACTGGAGACGTTCACTACCGCCGAGGGGGTCGTGACGCACAACACGATGAACACCTTCCACTACGCGGGCGTGGCCGAAATCGACGTCACGCAGGGGCTGCCCCGGCTCATCGAGCTGGTGGACGCCCGGAAGACGCCGGACACGCCGATGATGACGGTCCACCTCGACGAGGAGTACGCCGCCGACCGCGAGAAGGCCCACGAGGTGGTCTGGAAGATCGAGGCGACGCGCATCCTCGCGCTGGGCGACGTCTCGACGAACGTCGCGGACATGCTCGTCCGCATCGACCTCAACGAGGAGACCCTCGCCGAGCGGTGGCCGACCGTCGAGAGCGTCGACGACATCGCCGGCGAGATAGCCGACACCATCGAGTCGGCGCTCGGCGTCGACACGGTCCGGCCGAAGACGACCGTCGTCGAGTTCGGCCCCGACCAGCCCTCCTACCGGGAGCTGCTCCAGCTCGTCGAGGAGCTCCGCGAGGTCGTGTTCAAGGGCATCGACGAGATAAGCCGGGTCGTCATCCGGAAGGAGGAGACGGAGGACGGCAAGGGACAGGGTCACTCGGGCAGCGGGACGCAGTCCGGCGACGGCGAGGAGTTCGTCCTCTACACCGAGGGGTCGGCCTTCGGCGACGTCCTGGACATCGAGGGCGTCGACACCTCCCGGACGACCTGCAACAACATCCACGAGATACACGACAGCCTCGGCATCGAGGCGGCCCGCGAGGCCATCATCGAGGAGACGATGAACACCCTCGAGGAGCAGGGGCTGGACGACGTGAACATCCGGCACCTGATGCTCGTGGCCGACATCATGACCAACAACGGCGAAATCGAGTCCATCGGCCGGCACGGCATCTCCGGCAACAAGGACTCGGTGCTGGCGCGGGCGGCGTCACGGAGAACGTCATCGTCGGCAAGCCCATCAAGCTGGGCACCGGCGACGTCGACCTGCGGATGA
PROTEIN sequence
Length: 842
VELDHVEDIVRAVESEYLETRVDPLDPVGTVSAQSIGEPGTQMSLPASERVVVRRNGETDVTEIGQFVDSLMDGRETREFDGHEVALAPDGIEIPSLSADETIEWKPLEEVSRHETPDELLEFELESGRTIRATKAHSFVTRRDNGIVPVAGEALEPGDWLPVVASLDVEATGTDAVDLREYLPPSDYWYTSTLADGGVESVPAGADQLRDKRSALESGDLDEHTVYPVGGTVGLPEQFPLNDVTGFFIGAWLAEGSSTDHYVSVSNVDPDFQHRVRAFAERFDLSVNEYENDSGFATGYDIRVNGTVLADFLQAACVEDGEKVVPGFAFGATDRFAAALLRGYLSGDGNVGTNAVRASSISDRLIAGVSLLLARFNVYSTLGEQDGSRTLRVPKKHVPRFTDRVGLVGERGHELESLAAETDPNGPDATDQVPNFGDALEVLADAAGIPNRQVNAATNRQRIGRNRLARLVAEAEAELDGSIPELDALRKAIAGDVVWDRIESIETVESDHEHVYDFSVEGLETFTTAEGVVTHNTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVHLDEEYAADREKAHEVVWKIEATRILALGDVSTNVADMLVRIDLNEETLAERWPTVESVDDIAGEIADTIESALGVDTVRPKTTVVEFGPDQPSYRELLQLVEELREVVFKGIDEISRVVIRKEETEDGKGQGHSGSGTQSGDGEEFVLYTEGSAFGDVLDIEGVDTSRTTCNNIHEIHDSLGIEAAREAIIEETMNTLEEQGLDDVNIRHLMLVADIMTNNGEIESIGRHGISGNKDSVLARAASRRTSSSASPSSWAPATSTCG*