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sw_10_scaffold_5780_2

Organism: SW_10_Parcubacteria_45_8

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 4 / 38
Location: 131..1255

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:KKS37254.1}; TaxID=1618944 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_42_14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 377.0
  • Bit_score: 327
  • Evalue 1.80e-86
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 379.0
  • Bit_score: 284
  • Evalue 1.60e-73
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 26.2
  • Coverage: 397.0
  • Bit_score: 138
  • Evalue 4.10e-30

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Taxonomy

GWD2_OD1_42_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGTACGCTATGAATTTACTGAATAAAATAAAAGATACATTCACAAGCAGTACCGCCGGAGAGAGTGTCGTCGGTGTAGATATTACCGATTCATTTATCAAGGTAGTCGAACTTTCACGATCTGATCAGCGAGCGAAACTTGAAACGTACGGAAAAATTGCATTAGGACCCTACGGAGAAGCAGAAGTAGGGCAGGTGATCGGGCTTTCAAAAGATACAACAATAGAAGCACTGAAAGATGTACTGCGCGAATCAAAGGTAAGTACGAAAGAATGCGGGATTGCGATACCGATGAGCTCAAGCCTTACTTCATTTATTGAAGTACCGGCAATGGAGCGAGGAAAACTTGAGAATGTTGTGCCGATTGAGGCGAGAAAACATATTCCCGTACCACTTTCAGAGGTGTATCTTGATTGGCATATTATTCCGCGAGAGGAAGTTGAGTATGGTCGAGATGAAGAGTATTCAGAGGACTCTCTGAAAGTAATGGTTGTGGCAATTCATAAAGAGTCCATCAACTCATTTCAGACGATTATTGAAAAGGCGGATCTCAATCCTAATTTTTTCGAAATAGAAGTATTCAGCACTATACGAAGTGTGCTCAATAAGGATCTCTCATCGGTATTATTGGTGGATCTTGGCGCTGCTGTAACCAAGGTATATGTTGTGCGTCACGGTCTCGTGTTCGATTCACACGTTATCAATCGTGGTGGACAGGATATATCTGACTCTATTGCAAAATCCTTGGATGTGAGTTTTGGAAAAGCTGAAGAGCTGAAGCGGCAATTTGGACTAGATAATGGTGATGACTCGGAAGCGGCAGCGGCAGTTCATGAAAATGCATCGGTTATCTTCGAGGATATTCTGTCTGACGTTCAAGAAATTTTGATAGATTTTGAGACGGAGAACAATCAGTCAGTAAACAAAGTATTACTTACCGGCGGGACGGCAATATTCAGTGGTCTCCCCATGCTTGCTCGCGACTATCTTGATGCGGATGTCGAGCTTGGCGACCCGTTTGAAAAAGTTCACTCCCCGGCATTTTTAGATGAGACCTTACAAGAAGCCGGTCCGGAGTTTGCAGTTGCGATAGGCGTTGCTTTGCGAAATCTCCAGGGTCGCTAG
PROTEIN sequence
Length: 375
MYAMNLLNKIKDTFTSSTAGESVVGVDITDSFIKVVELSRSDQRAKLETYGKIALGPYGEAEVGQVIGLSKDTTIEALKDVLRESKVSTKECGIAIPMSSSLTSFIEVPAMERGKLENVVPIEARKHIPVPLSEVYLDWHIIPREEVEYGRDEEYSEDSLKVMVVAIHKESINSFQTIIEKADLNPNFFEIEVFSTIRSVLNKDLSSVLLVDLGAAVTKVYVVRHGLVFDSHVINRGGQDISDSIAKSLDVSFGKAEELKRQFGLDNGDDSEAAAAVHENASVIFEDILSDVQEILIDFETENNQSVNKVLLTGGTAIFSGLPMLARDYLDADVELGDPFEKVHSPAFLDETLQEAGPEFAVAIGVALRNLQGR*