ggKbase home page

sw_10_scaffold_5780_5

Organism: SW_10_Parcubacteria_45_8

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 4 / 38
Location: 2868..4160

Top 3 Functional Annotations

Value Algorithm Source
Type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:KKT44861.1}; TaxID=1618831 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 418.0
  • Bit_score: 528
  • Evalue 1.10e-146
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 427.0
  • Bit_score: 510
  • Evalue 2.10e-141
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 431.0
  • Bit_score: 368
  • Evalue 3.70e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_OD1_44_15_partial → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGATTATCTTCTAGAGTTCTCAAAGAAAGATAAAGCGCTCGATGCAATTCTTCAAAAACACGGCATTACAAGAGAGCAAGTTCTTTCAGTCAAAAGTGACTACTATGGCGTACCAAGCATTGATATAGCGAATACGTCCATACCACACCAAACATTGCAAGTTATTCCGCAAGAGTCATCAAGGCACTACAAGATTATTCCGCTGGAAGTAAATGATGATACGCTGGAAGTAGGCTTTGTGGACCCTGATAACCGACAAGCGCTCGATGCCGTACAATTTATCGCGAACAAGCGCAACTTGACGATTGAGAAGTATGTCATCACCGAGAGTGATTTTCGTGAGCGGTTTGAGGATTATGAAAGTCTGTCAGGTGAGGTGTCACAGGCGCTTGATGATCTTGAAACAGAACTTTCATCTGAAGAAAAGCAAGTATCTGAAGATATTGAGGCACTATCAGAAGACTCGGATGAGACTGTAAAAGAAGATGAGGGCGGAAAGAAAAGAATTGTCGAGGATGCGCCGGTGACCAAGATTGTTGCAACGATATTGCAGTATGCAACCGAAGGCGGTGCCTCGGATGTACATATCGAGCCAATGGAAGAGCGGATTCGCGTCCGCTTTCGCGTCAGTGGCACGTTACATACCTCACTGCAGCTTCCAACCAGTGTGAAAAGTGCGGTAGTTGCGCGAATAAAAATCCTCTCAGAGCTGAAGCTGGATGAGCGTCGGAAGCCACAAGACGGACGTTTTTCTGCTCATATTCAGGGTCGAAAAGTGGATTTTCGTGTCTCAACATTTCCAACATATTATGGAGAGAAAGTAGTCATGCGACTCCTTGATCCGGAGCAAGGAGATATTCCGCTAGAGGAGCTGGGGATGACAAAACGCAATTATAACCTTGTGAAAGATGCGATTACCCAGCCACATGGGATGATACTTATATCCGGTCCGACCGGTTCGGGAAAGACAACTACTCTTTACTCAATGCTGAAGGATGTTGATACAGACACGCAGAATGTCTTAAGTCTTGAGGATCCGGTAGAATATAAAGTGCCGGGGATAAACCAGTCGCAGGTGCAACCGGAGATCGGGTATACATTCGCGAATGGATTACGTACAACATTACGACAAGACCCCGATATTATCATGGTCGGCGAGATTCGTGACGAGGAAACGGCGGGTTTGGCGATCCAGGCGGCACTTACCGGCCACTTGGTGATGTCTACTATTCACACAAACAGTGCCGCGGGTATCATCCCACGCTTGATTGATATGGGAGTGGATCCGTAC
PROTEIN sequence
Length: 431
MDYLLEFSKKDKALDAILQKHGITREQVLSVKSDYYGVPSIDIANTSIPHQTLQVIPQESSRHYKIIPLEVNDDTLEVGFVDPDNRQALDAVQFIANKRNLTIEKYVITESDFRERFEDYESLSGEVSQALDDLETELSSEEKQVSEDIEALSEDSDETVKEDEGGKKRIVEDAPVTKIVATILQYATEGGASDVHIEPMEERIRVRFRVSGTLHTSLQLPTSVKSAVVARIKILSELKLDERRKPQDGRFSAHIQGRKVDFRVSTFPTYYGEKVVMRLLDPEQGDIPLEELGMTKRNYNLVKDAITQPHGMILISGPTGSGKTTTLYSMLKDVDTDTQNVLSLEDPVEYKVPGINQSQVQPEIGYTFANGLRTTLRQDPDIIMVGEIRDEETAGLAIQAALTGHLVMSTIHTNSAAGIIPRLIDMGVDPY