ggKbase home page

sw_10_scaffold_10948_1

Organism: SW_10_Chlorophyta_55_6

partial RP 13 / 55 MC: 4 BSCG 9 / 51 MC: 3 ASCG 8 / 38
Location: 389..1555

Top 3 Functional Annotations

Value Algorithm Source
SNF2 super family n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1E3W2_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 328.0
  • Bit_score: 291
  • Evalue 1.40e-75
SNF2 super family {ECO:0000313|EMBL:ACO62624.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromona similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 328.0
  • Bit_score: 291
  • Evalue 2.00e-75
SWF/SNF family helicase similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 241.0
  • Bit_score: 90
  • Evalue 1.00e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonas sp. RCC299 → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1167
ATGCCCAAGGAGCTGGAGCCCGGCGAGAGAGTGACGATAGACGAGGACAGAGGGACGTGGAGACCCGCAGAGCCCGAGGAGTCGTGCTACGTCGCGTCTGTGGAGTACGCGAAGTCGGGCAGGGCGAAATGCAGGCGTTGCTCAAGCGTCGTCAAGAAGGGCGAGCCCCGCGTGGGCTTTCCAATTCCGGAGCGTCGAGGCGAATTCGGTATCATCTCCGCGTGGCAGCACCCACAGTGCAGCCGCGTGTCGGACGTCTCGCGAAAGTCGCTGCAGCATCAGCTCTGGGGCCTCTTGCAGCTTCATGAGTCTGACCAGAACCTCGTACTCTCCGAGCTTTGCAGTTCGGAGGCAGCTCCACTTGACGAGATCCGCCCCGAGGACGAGGCCTTCTTCCAAAGCAAACCCACCATCTCCCCAATGGAACCCTCCGAGTCTCTCACTCGCACTCTCCTTCCCTTCCAGAAGGAGGGTCTCTCCTGGCTTGTGCAGCAGGAGCATTCCGATTGCGCCGGCGGCATCCTCGCCGATGAAATGGGCATGGGCAAAACCATCCAGATGGTTGCAATGCTCGTTCAACGCAAGCAGATGGCCAACAATGCCCTTCTCTCCAGCGATGAGGCCAACAACCACGGCGCTGGTCCCACCCTTATCGTCTGCCCCACCTCAGCTATGCCCCAATGGGCCGACGAGATCTGCTCTTTTACCGAAGAGGGCACTCTCTCCGTCGCTACCTACTACGGCGACCGGAAGTCCTTTTCTAGCGCCGTACTCCAGGAATACGACGTTGTCGTCACCACATACCCTGTCGTGGAGCGTGAGTGGCGCACCATTGCCGAGAACATGAAGGTCGAGTGCAAGTACTGCGGCAAGCGCTACATGCCTCGCGCGCTTACTGTGCACAACCAGTACTTCTGCGGCCCGGGCGCCGCAAAGTCTGAAGCTCTCCAGTATAAGGAAAAGAAGAATAATGACGCGAACGACACCGCCGATGCCGCTCCTGAAGCTGACAACTCCAGCGACAAACGCACTGGGCAGCGTGCCGAGACAATGCAGAAAGGCATGCGCACACTTGGTATCGGCAAGCAAGAGGATCGCCAGCAGCTGGCGGAACGAAAGGACGTNNNCGAGCCGTGCCCACGCCAATGGCTGTGTACAACGAGATGA
PROTEIN sequence
Length: 389
MPKELEPGERVTIDEDRGTWRPAEPEESCYVASVEYAKSGRAKCRRCSSVVKKGEPRVGFPIPERRGEFGIISAWQHPQCSRVSDVSRKSLQHQLWGLLQLHESDQNLVLSELCSSEAAPLDEIRPEDEAFFQSKPTISPMEPSESLTRTLLPFQKEGLSWLVQQEHSDCAGGILADEMGMGKTIQMVAMLVQRKQMANNALLSSDEANNHGAGPTLIVCPTSAMPQWADEICSFTEEGTLSVATYYGDRKSFSSAVLQEYDVVVTTYPVVEREWRTIAENMKVECKYCGKRYMPRALTVHNQYFCGPGAAKSEALQYKEKKNNDANDTADAAPEADNSSDKRTGQRAETMQKGMRTLGIGKQEDRQQLAERKDXXEPCPRQWLCTTR*